Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.5e-250 869.8 749 100.0
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 3.6e-98 363.6 734 54.5
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.7e-79 300.4 733 42.8
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 4.4e-72 276.9 726 46.4
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.7e-71 275.0 726 46.0
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 6.0e-69 266.5 727 41.4
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.9e-67 261.5 723 46.9
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.6e-67 259.2 770 44.2
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.6e-67 259.2 769 47.3
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 6.4e-63 246.5 726 49.7
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 7.1e-62 243.0 726 48.3
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 9.3e-62 242.7 723 51.0
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.1e-59 235.7 722 44.6
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.5e-59 235.3 724 50.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.6e-58 230.7 719 46.9
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.1e-57 229.2 733 49.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.0e-57 227.3 776 44.8
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.0e-56 224.9 720 46.9
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.3e-55 222.2 741 53.7
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 6.4e-55 219.9 732 53.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 6.4e-55 219.9 769 43.0
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.4e-54 218.8 756 40.5
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.9e-54 218.4 733 46.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 3.9e-52 210.7 731 49.5
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.5e-51 208.8 776 44.8
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 4.3e-51 207.2 724 47.9
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 7.4e-51 206.5 770 36.6
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.1e-50 204.9 721 42.6
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.8e-50 204.5 727 36.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 3.7e-50 204.1 737 40.8
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.7e-50 204.1 776 43.3
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.4e-48 197.6 738 49.7
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.0e-47 196.1 713 49.8
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 6.5e-47 193.4 730 48.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 3.2e-46 191.0 732 42.2
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 5.5e-46 190.3 731 38.3
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.2e-45 189.1 726 47.5
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.6e-45 188.7 771 42.9
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 4.6e-45 187.2 733 43.9
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.0e-44 186.0 766 42.0
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.0e-44 186.0 770 39.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.3e-44 185.7 732 49.0
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.3e-44 184.9 776 41.6
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-43 182.6 770 37.4
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 4.3e-43 180.6 742 41.4
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.6e-42 178.7 731 50.5
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.8e-42 177.9 732 43.6
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 5.3e-41 173.7 737 53.2
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.2e-40 172.6 726 46.6
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.5e-40 172.2 753 40.1
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 4.5e-40 170.6 777 43.2
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.0e-39 169.5 726 44.8
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 2.2e-39 168.3 730 38.4
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.8e-39 167.5 730 42.3
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.1e-38 166.0 745 43.5
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.9e-38 165.2 736 39.7
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.1e-37 161.8 717 46.7
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 4.3e-35 154.1 454 42.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 8.2e-34 149.8 535 46.0
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.4e-33 149.1 735 36.3
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.8e-33 148.7 435 48.7
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.8e-33 148.7 729 39.6
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.5e-32 145.6 731 42.4
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.0e-32 145.2 723 43.7
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.0e-32 145.2 726 46.4
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.3e-31 142.5 769 43.7
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.7e-31 142.1 481 50.1
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 3.8e-31 141.0 705 44.7
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 5.0e-31 140.6 736 42.4
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 3.2e-30 137.9 457 39.2
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 4.2e-30 137.5 725 40.7
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 5.5e-30 137.1 743 45.6
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 7.2e-30 136.7 478 37.7
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 7.2e-30 136.7 478 37.7
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 7.2e-30 136.7 739 38.7
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.2e-29 136.0 775 43.7
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.6e-29 135.6 733 43.2
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.6e-29 135.6 728 44.1
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 6.7e-28 130.2 761 40.9
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.5e-27 128.3 783 42.7
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.3e-27 127.5 727 36.5
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 9.7e-27 126.3 685 41.2
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.2e-26 125.2 744 46.4
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.2e-26 125.2 746 36.5
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.1e-25 122.9 747 43.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.4e-25 121.7 461 38.2
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 7.7e-24 116.7 684 41.4
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 2.9e-23 114.8 172 42.4
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.9e-23 114.8 767 42.4
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 5.0e-23 114.0 404 40.8
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.0e-23 114.0 235 35.7
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 8.5e-23 113.2 695 37.0
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.1e-22 112.8 732 37.8
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.2e-22 110.9 771 34.8
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.6e-21 107.8 220 49.1
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 4.7e-21 107.5 175 51.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.8e-20 105.5 124 50.8
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.7e-18 97.8 124 47.6
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.8e-17 95.5 366 41.3
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.1e-14 86.3 111 47.7
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.4e-14 83.2 348 29.6
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.4e-11 74.3 217 31.3
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 9.7e-11 73.2 127 39.4
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.8e-10 71.6 148 36.5
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 4.1e-09 67.8 156 32.1
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.9e-08 63.9 86 45.3
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.9e-08 63.9 129 31.8
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.9e-07 61.6 345 39.1
BraA03t10057Z Brassica rapa HOM05D000032 ORTHO05D021207 2.9e-07 61.6 74 44.6
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 1.9e-06 58.9 66 48.5


User provided reference genes

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