Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 2.8e-160 568.5 285 100.0
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 4.3e-100 368.6 311 65.3
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 8.3e-88 327.8 327 57.2
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 3.5e-86 322.4 326 57.1
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 1.6e-83 313.5 305 59.0
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 4.7e-83 312.0 323 56.3
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.8e-82 310.1 321 54.8
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.5e-81 307.0 331 54.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 7.6e-81 304.7 313 57.2
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.2e-78 297.4 319 52.7
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 7.8e-78 294.7 320 53.4
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 3.9e-77 292.4 295 59.0
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 6.9e-74 281.6 320 51.6
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.2e-73 280.8 302 55.0
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 3.4e-73 279.3 320 51.6
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 5.8e-73 278.5 338 49.4
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 6.4e-72 275.0 310 52.9
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 8.4e-72 274.6 321 52.0
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 2.4e-71 273.1 316 50.6
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 2.7e-70 269.6 310 50.3
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.0e-69 267.7 317 49.8
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 2.3e-69 266.5 299 51.5
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 3.0e-69 266.2 298 51.7
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 5.1e-69 265.4 311 50.5
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 8.7e-69 264.6 312 49.7
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.1e-68 264.2 318 50.6
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 1.9e-68 263.5 316 50.3
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.5e-68 263.1 313 50.8
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 4.3e-68 262.3 297 49.8
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 4.3e-68 262.3 302 51.3
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 5.6e-68 261.9 339 47.2
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 5.6e-68 261.9 311 47.9
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.1e-67 260.0 313 50.5
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 4.8e-67 258.8 301 50.5
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 6.2e-67 258.5 296 49.3
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 6.2e-67 258.5 299 48.8
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 8.1e-67 258.1 275 54.9
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.1e-66 257.7 340 46.5
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.1e-66 257.7 313 50.5
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 5.3e-66 255.4 300 48.0
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 6.9e-66 255.0 305 47.9
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 6.9e-66 255.0 311 49.5
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 6.9e-66 255.0 310 48.4
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 6.9e-66 255.0 307 50.5
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.5e-65 253.8 299 48.2
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 1.5e-65 253.8 317 48.3
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.6e-65 253.1 300 49.7
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 3.4e-65 252.7 315 49.2
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 3.4e-65 252.7 300 49.3
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 7.6e-65 251.5 296 51.0
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.3e-64 250.8 309 47.9
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 1.7e-64 250.4 316 48.7
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.7e-64 250.4 298 49.0
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 6.4e-64 248.4 315 47.6
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 8.4e-64 248.1 315 46.7
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 8.4e-64 248.1 319 46.4
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 8.4e-64 248.1 313 47.6
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 1.1e-63 247.7 316 47.5
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.1e-63 247.7 319 45.8
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.4e-63 247.3 314 47.5
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.4e-63 246.5 315 47.3
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 2.4e-63 246.5 303 48.2
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 3.2e-63 246.1 300 50.0
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 7.1e-63 245.0 315 48.9
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 7.1e-63 245.0 316 48.1
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 7.1e-63 245.0 306 48.7
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.2e-62 244.2 329 46.8
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 3.5e-62 242.7 313 47.0
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 4.6e-62 242.3 301 49.8
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 6.0e-62 241.9 308 46.4
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 2.3e-61 240.0 300 48.0
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 2.3e-61 240.0 310 45.8
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 8.7e-61 238.0 307 47.9
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 8.7e-61 238.0 323 46.1
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 1.9e-60 236.9 307 45.9
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 4.3e-60 235.7 310 46.5
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 7.4e-60 235.0 320 45.6
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 9.6e-60 234.6 302 45.0
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.1e-59 233.4 304 46.7
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.8e-59 232.3 305 46.6
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 1.1e-58 231.1 311 46.6
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 1.4e-58 230.7 296 48.0
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 5.3e-58 228.8 319 46.1
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 9.9e-57 224.6 311 44.1
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.7e-56 223.8 304 44.1
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.7e-56 223.8 304 44.1
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.8e-56 222.6 277 49.1
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.9e-55 220.3 302 43.7
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.8e-53 213.8 301 45.5
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 3.0e-53 213.0 306 45.4
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.5e-52 209.9 301 43.5
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 3.3e-52 209.5 297 43.8
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 9.6e-52 208.0 316 41.8
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 5.3e-50 202.2 289 43.9
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 5.3e-50 202.2 199 55.3
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 6.5e-48 195.3 230 49.6
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 1.1e-47 194.5 290 45.2
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 2.5e-47 193.4 299 42.5
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 1.8e-45 187.2 303 41.6
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 2.5e-44 183.3 180 55.6
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 5.7e-44 182.2 322 39.8
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 1.4e-39 167.5 387 31.8
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 3.2e-39 166.4 176 52.3
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 4.2e-39 166.0 271 39.9
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 3.0e-37 159.8 288 38.9
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 1.0e-32 144.8 286 36.4
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 2.5e-31 140.2 343 32.4
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 3.9e-29 132.9 289 37.0
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 1.4e-23 114.4 192 41.1
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 6.1e-22 109.0 136 45.6
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.0e-21 108.2 216 38.4
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.4e-21 107.8 184 40.8
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 5.2e-21 105.9 384 24.5
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 1.5e-20 104.4 212 34.4
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.2e-12 78.2 66 59.1
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.1e-10 71.6 64 54.7
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 3.1e-10 70.1 169 32.5
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 3.8e-08 63.2 121 38.0
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 5.5e-07 59.3 105 46.7
HanXRQChr01g0013001 Helianthus annuus HOM05D006207 ORTHO05D007868 9.4e-07 58.5 33 81.8


User provided reference genes

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