Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 2.4e-254 881.7 463 100.0
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.2e-189 666.8 463 75.8
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.8e-164 583.2 387 80.1
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 7.8e-160 567.8 464 66.6
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 9.5e-158 560.8 489 63.6
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.6e-157 560.1 460 65.2
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 3.6e-157 558.9 468 64.3
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 8.1e-157 557.8 463 64.1
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 8.9e-156 554.3 462 64.5
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 5.8e-155 551.6 470 62.1
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 5.4e-153 545.0 468 63.5
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 2.1e-152 543.1 461 64.4
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 3.5e-152 542.3 486 61.9
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 3.5e-152 542.3 464 61.2
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 7.8e-152 541.2 458 63.3
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 3.0e-151 539.3 466 61.6
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 6.6e-151 538.1 463 62.0
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.1e-150 537.3 491 61.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 1.5e-150 537.0 473 61.7
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.9e-150 536.6 468 63.0
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.5e-150 536.2 462 61.5
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.3e-150 535.8 490 61.6
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 4.3e-150 535.4 474 62.7
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 7.3e-150 534.6 498 59.6
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 9.5e-150 534.3 466 62.9
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 9.5e-150 534.3 463 62.0
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.2e-149 533.9 463 61.8
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.2e-149 533.9 463 60.7
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 2.8e-149 532.7 463 62.4
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 2.8e-149 532.7 463 62.4
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 4.7e-149 531.9 467 61.5
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 4.7e-149 531.9 462 60.6
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 8.1e-149 531.2 467 61.5
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.8e-148 530.0 463 60.9
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.8e-148 530.0 459 61.9
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.8e-148 530.0 488 59.6
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.1e-148 529.3 465 60.6
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 3.1e-148 529.3 461 61.2
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 5.2e-148 528.5 454 61.7
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 8.9e-148 527.7 459 61.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 8.9e-148 527.7 471 61.1
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 8.9e-148 527.7 465 61.1
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 2.6e-147 526.2 461 61.2
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.4e-147 525.8 459 61.2
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 3.4e-147 525.8 466 61.8
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 3.4e-147 525.8 465 61.5
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 5.8e-147 525.0 483 62.3
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 5.8e-147 525.0 477 61.2
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 7.6e-147 524.6 469 62.0
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.3e-146 523.9 461 59.2
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.7e-146 523.5 468 60.3
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 8.4e-146 521.2 463 61.3
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 2.4e-145 519.6 458 59.6
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.3e-143 513.8 462 60.0
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 1.7e-143 513.5 462 60.2
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.0e-143 512.7 454 59.9
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 3.9e-143 512.3 461 60.7
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 6.6e-143 511.5 462 59.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.5e-142 509.6 456 60.1
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 6.2e-141 505.0 469 59.5
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 1.1e-140 504.2 463 58.1
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 6.8e-140 501.5 455 59.3
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 8.9e-140 501.1 439 62.2
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 1.2e-139 500.7 474 56.1
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.6e-139 499.6 465 58.3
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 9.9e-139 497.7 461 59.4
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 1.1e-137 494.2 422 62.1
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.1e-137 491.5 458 58.5
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 9.3e-137 491.1 461 56.4
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 4.6e-136 488.8 460 56.3
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 4.6e-136 488.8 413 64.6
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 6.0e-136 488.4 413 62.2
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.3e-135 486.5 460 56.7
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 8.7e-135 484.6 464 55.8
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 8.7e-135 484.6 478 55.6
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.1e-134 484.2 460 56.7
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 2.5e-134 483.0 458 55.7
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 2.5e-134 483.0 464 55.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.3e-133 480.7 464 55.0
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.8e-133 479.6 464 55.6
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 9.0e-132 474.6 464 54.7
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 9.3e-129 464.5 486 53.5
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 7.9e-128 461.5 478 52.9
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 3.0e-127 459.5 461 55.7
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.5e-126 457.2 463 54.9
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.8e-124 450.3 427 59.0
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.9e-122 443.0 468 53.0
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 3.8e-122 442.6 469 53.7
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 1.3e-119 434.1 463 52.7
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 3.0e-119 433.0 371 62.0
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.4e-115 419.5 475 49.1
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 2.2e-114 416.8 321 67.6
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 3.8e-114 416.0 462 50.2
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.8e-114 416.0 475 49.3
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 1.1e-113 414.5 322 65.5
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.6e-112 410.6 476 47.1
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.9e-111 406.0 360 61.4
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 8.5e-106 388.3 326 64.7
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.5e-102 377.5 331 60.4
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.9e-98 363.2 511 45.6
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.6e-96 357.5 319 61.4
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 5.7e-94 349.0 329 58.1
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.2e-88 331.3 365 51.5
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 7.2e-81 305.4 480 38.5
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 6.3e-77 292.4 294 57.5
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.1e-76 291.6 267 59.2
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 5.3e-76 289.3 344 49.4
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.2e-75 288.1 220 65.9
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 4.8e-69 266.2 424 38.2
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 2.6e-62 243.8 342 45.6
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 4.7e-56 223.0 487 32.2
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.6e-46 190.7 162 62.3
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 9.8e-46 188.7 483 32.3
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 2.3e-39 167.5 196 49.5
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 4.9e-29 133.3 505 25.9
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.9e-28 131.3 128 59.4
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 2.4e-23 114.4 133 50.4
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 2.4e-23 114.4 84 69.0
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 6.9e-23 112.8 398 28.9
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 6.4e-21 106.3 85 63.5
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.4e-20 105.1 379 30.9
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 1.9e-20 104.8 86 66.3
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 2.4e-20 104.4 85 63.5
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 1.1e-17 95.5 100 51.0
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-17 94.0 438 25.3
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 2.2e-13 81.3 100 47.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 2.5e-09 67.8 75 42.7
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 9.6e-09 65.9 75 41.3
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 1.5e-06 58.5 80 48.8
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 9.9e-06 55.8 40 67.5


User provided reference genes

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