Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 1.2e-28 129.0 61 100.0
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 1.4e-16 89.0 59 74.6
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 2.5e-13 78.2 60 63.3
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 6.1e-12 73.6 58 63.8
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.1e-10 69.3 54 61.1
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.0e-10 68.6 59 55.9
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 2.0e-10 68.6 59 55.9
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 7.4e-10 66.6 61 55.7
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 9.7e-10 66.2 66 54.5
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 1.3e-09 65.9 59 55.9
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 1.7e-09 65.5 51 62.7
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 1.7e-09 65.5 54 59.3
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 2.2e-09 65.1 54 57.4
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 2.8e-09 64.7 52 59.6
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 3.7e-09 64.3 58 51.7
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 4.8e-09 63.9 54 55.6
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 4.8e-09 63.9 53 56.6
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 6.3e-09 63.5 54 57.4
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 1.4e-08 62.4 51 60.8
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 2.4e-08 61.6 56 51.8
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 2.4e-08 61.6 52 55.8
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 4.1e-08 60.8 50 54.0
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 4.1e-08 60.8 50 54.0
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 4.1e-08 60.8 50 54.0
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 4.1e-08 60.8 51 58.8
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 4.1e-08 60.8 56 51.8
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 4.1e-08 60.8 58 53.4
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 4.1e-08 60.8 57 52.6
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 4.1e-08 60.8 53 58.5
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 5.3e-08 60.5 55 56.4
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 5.3e-08 60.5 52 55.8
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 6.9e-08 60.1 50 60.0
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 1.2e-07 59.3 56 53.6
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 1.5e-07 58.9 50 52.0
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 1.5e-07 58.9 50 52.0
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 2.0e-07 58.5 54 51.9
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 2.0e-07 58.5 47 55.3
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 2.0e-07 58.5 49 55.1
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 2.6e-07 58.2 54 50.0
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 2.6e-07 58.2 48 56.2
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 3.4e-07 57.8 53 50.9
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 3.4e-07 57.8 51 58.8
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 4.5e-07 57.4 53 47.2
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 7.7e-07 56.6 48 52.1
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 7.7e-07 56.6 48 52.1
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 1.3e-06 55.8 54 51.9
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 1.3e-06 55.8 47 55.3
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 1.3e-06 55.8 48 54.2
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 1.7e-06 55.5 51 52.9
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 1.7e-06 55.5 50 48.0
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 3.8e-06 54.3 52 51.9
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 6.5e-06 53.5 51 49.0
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 6.5e-06 53.5 51 54.9
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 8.5e-06 53.1 56 44.6
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 8.5e-06 53.1 54 48.1


User provided reference genes

Program Settings