Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0506631 Helianthus annuus HOM05D003235 ORTHO05D003863 1.6e-31 138.7 62 100.0
HanXRQChr14g0458991 Helianthus annuus HOM05D003235 ORTHO05D003863 8.6e-30 132.9 59 98.3
ECA233G5747 Erigeron canadensis HOM05D003235 ORTHO05D003863 5.6e-29 130.2 59 94.9
ECA236G3279 Erigeron canadensis HOM05D003235 ORTHO05D003863 4.7e-28 127.1 59 89.8
Lj9A405T66 Lonicera japonica HOM05D003235 ORTHO05D003863 4.7e-28 127.1 59 89.8
Sopen08g030600 Solanum pennellii HOM05D003235 ORTHO05D003863 4.7e-28 127.1 59 89.8
PGSC0003DMG400012284 Solanum tuberosum HOM05D003235 ORTHO05D003863 4.7e-28 127.1 59 89.8
HanXRQChr11g0335221 Helianthus annuus HOM05D003235 ORTHO05D003863 6.1e-28 126.7 58 93.1
Lsat_1_v5_gn_7_116021 Lactuca sativa HOM05D003235 ORTHO05D003863 6.1e-28 126.7 58 93.1
Nitab4.5_0000783g0290 Nicotiana tabacum HOM05D003235 ORTHO05D003863 6.1e-28 126.7 59 89.8
Nitab4.5_0006796g0050 Nicotiana tabacum HOM05D003235 ORTHO05D003863 6.1e-28 126.7 59 89.8
Peaxi162Scf00362g00250 Petunia axillaris HOM05D003235 ORTHO05D003863 6.1e-28 126.7 59 91.5
Solyc08g082340.3 Solanum lycopersicum HOM05D003235 ORTHO05D003863 6.1e-28 126.7 59 88.1
GSVIVG01023935001 Vitis vinifera HOM05D003235 ORTHO05D003863 6.1e-28 126.7 58 93.1
Potri.004G183300 Populus trichocarpa HOM05D003235 ORTHO05D003863 1.0e-27 125.9 59 91.5
Potri.009G143200 Populus trichocarpa HOM05D003235 ORTHO05D003863 1.0e-27 125.9 59 91.5
CAN.G1235.15 Capsicum annuum HOM05D003235 ORTHO05D003863 1.8e-27 125.2 58 89.7
CARHR274300 Cardamine hirsuta HOM05D003235 ORTHO05D003863 1.8e-27 125.2 59 89.8
MBI02_g34309_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 1.8e-27 125.2 59 88.1
SGA_v2.0_scaffold98G29294 Striga asiatica HOM05D003235 ORTHO05D003863 1.8e-27 125.2 59 89.8
CAN.G1804.1 Capsicum annuum HOM05D003235 ORTHO05D003863 2.3e-27 124.8 57 91.2
Nn1g03654 Nelumbo nucifera HOM05D003235 ORTHO05D003863 2.3e-27 124.8 58 87.9
Sabra09G0111000 Salix brachista HOM05D003235 ORTHO05D003863 2.3e-27 124.8 58 91.4
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 3.0e-27 124.4 57 93.0
AagrBONN_evm.TU.Sc2ySwM_344.1475 Anthoceros agrestis HOM05D003235 ORTHO05D003863 4.0e-27 124.0 60 86.7
Thhalv10013846m.g Eutrema salsugineum HOM05D003235 ORTHO05D003863 4.0e-27 124.0 59 89.8
Manes.11G106900 Manihot esculenta HOM05D003235 ORTHO05D003863 4.0e-27 124.0 58 86.2
Aqoxy7G01395 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 5.2e-27 123.6 60 85.0
MSTRG.27622 Avicennia marina HOM05D003235 ORTHO05D003863 6.8e-27 123.2 59 88.1
Migut.N01350 Erythranthe guttata HOM05D003235 ORTHO05D003863 6.8e-27 123.2 59 88.1
CANSAT11G0145 Cannabis sativa HOM05D003235 ORTHO05D003863 8.9e-27 122.9 59 89.8
HPP92_011715 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.2e-26 122.5 57 87.7
Dinv14158 Davidia involucrata HOM05D003235 ORTHO05D003863 1.5e-26 122.1 58 89.7
Manes.04G065100 Manihot esculenta HOM05D003235 ORTHO05D003863 1.5e-26 122.1 58 87.9
AL8G37210 Arabidopsis lyrata HOM05D003235 ORTHO05D003863 2.0e-26 121.7 59 88.1
Carub.0008s2130 Capsella rubella HOM05D003235 ORTHO05D003863 2.0e-26 121.7 59 88.1
MD10G1138100 Malus domestica HOM05D003235 ORTHO05D003863 2.0e-26 121.7 58 89.7
Prupe.8G176600 Prunus persica HOM05D003235 ORTHO05D003863 2.0e-26 121.7 58 89.7
CiPaw.06G117700 Carya illinoinensis HOM05D003235 ORTHO05D003863 2.6e-26 121.3 58 91.4
Haze_02042 Corylus avellana HOM05D003235 ORTHO05D003863 2.6e-26 121.3 59 89.8
FvH4_5g27680 Fragaria vesca HOM05D003235 ORTHO05D003863 2.6e-26 121.3 58 87.9
Os07g0531600 Oryza sativa ssp. japonica HOM05D003235 ORTHO05D003863 2.6e-26 121.3 59 86.4
Sed0009233 Sechium edule HOM05D003235 ORTHO05D003863 3.4e-26 120.9 58 87.9
Aa31LG2G14790 Aethionema arabicum HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
EL10Ac3g05050 Beta vulgaris HOM05D003235 ORTHO05D003863 4.4e-26 120.6 60 83.3
BcaNung00615 Brassica carinata HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
BcaNung00616 Brassica carinata HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
A01p03310 Brassica napus HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
C01p03650 Brassica napus HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
BolC1t00356H Brassica oleracea HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
BraA01t00316Z Brassica rapa HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
ClCG02G003570 Citrullus lanatus HOM05D003235 ORTHO05D003863 4.4e-26 120.6 58 87.9
MELO3C013265.2 Cucumis melo HOM05D003235 ORTHO05D003863 4.4e-26 120.6 58 87.9
Duzib248G1500 Durio zibethinus HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
Sp6g22200 Schrenkiella parvula HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 86.4
THA.LOC104807394 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 4.4e-26 120.6 59 88.1
Aqoxy4G02019 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 5.7e-26 120.2 59 84.7
COL.COLO4_17945 Corchorus olitorius HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 89.7
COL.COLO4_24688 Corchorus olitorius HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 89.7
MD00G1083900 Malus domestica HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 87.9
PGR142G4436 Punica granatum HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 87.9
Sed0003744 Sechium edule HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 86.2
Thecc.02G046900 Theobroma cacao HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 89.7
unitig_749.g13984 Utricularia gibba HOM05D003235 ORTHO05D003863 5.7e-26 120.2 58 87.9
CSS0024694 Camellia sinensis var. sinensis HOM05D003235 ORTHO05D003863 7.5e-26 119.8 59 89.8
Gohir.D02G230900 Gossypium hirsutum HOM05D003235 ORTHO05D003863 7.5e-26 119.8 57 91.2
Gorai.005G258500 Gossypium raimondii HOM05D003235 ORTHO05D003863 7.5e-26 119.8 57 91.2
Lalb_Chr15g0083901 Lupinus albus HOM05D003235 ORTHO05D003863 7.5e-26 119.8 58 89.7
Zm00001eb396350 Zea mays HOM05D003235 ORTHO05D003863 7.5e-26 119.8 59 84.7
Actinidia20561 Actinidia chinensis HOM05D003235 ORTHO05D003863 9.8e-26 119.4 58 91.4
CiPaw.05G089800 Carya illinoinensis HOM05D003235 ORTHO05D003863 9.8e-26 119.4 58 89.7
Ca_02021_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 9.8e-26 119.4 58 87.9
Sp7g33030 Schrenkiella parvula HOM05D003235 ORTHO05D003863 9.8e-26 119.4 59 86.4
TWI79G1341 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 9.8e-26 119.4 59 83.1
Actinidia26336 Actinidia chinensis HOM05D003235 ORTHO05D003863 1.3e-25 119.0 58 89.7
CsaV3_7G001740 Cucumis sativus L. HOM05D003235 ORTHO05D003863 1.3e-25 119.0 58 86.2
FvH4_2g16380 Fragaria vesca HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
FAN15G0986 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
FAN24G0538 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
FAN24G1371 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
FAN27G1339 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
Lalb_Chr20g0114201 Lupinus albus HOM05D003235 ORTHO05D003863 1.3e-25 119.0 58 87.9
QL11p054430 Quercus lobata HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 86.4
QL11p054583 Quercus lobata HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 86.4
Zm00001eb323170 Zea mays HOM05D003235 ORTHO05D003863 1.3e-25 119.0 59 83.1
BcaB08g36361 Brassica carinata HOM05D003235 ORTHO05D003863 1.7e-25 118.6 57 87.7
C09p53360 Brassica napus HOM05D003235 ORTHO05D003863 1.7e-25 118.6 57 87.7
RcHm_v2.0_Chr6g0280151 Rosa chinensis HOM05D003235 ORTHO05D003863 1.7e-25 118.6 58 82.8
Atru.chr5.3499 Acer truncatum HOM05D003235 ORTHO05D003863 2.2e-25 118.2 60 86.7
AT5G60620 Arabidopsis thaliana HOM05D003235 ORTHO05D003863 2.2e-25 118.2 59 86.4
BcaC04g19724 Brassica carinata HOM05D003235 ORTHO05D003863 2.2e-25 118.2 57 86.0
A10p17830 Brassica napus HOM05D003235 ORTHO05D003863 2.2e-25 118.2 57 86.0
BolC9t58209H Brassica oleracea HOM05D003235 ORTHO05D003863 2.2e-25 118.2 57 86.0
Glyma.09G119200 Glycine max HOM05D003235 ORTHO05D003863 2.2e-25 118.2 59 84.7
Rhsim11G0196500 Rhododendron simsii HOM05D003235 ORTHO05D003863 2.2e-25 118.2 56 92.9
QL10p000641 Quercus lobata HOM05D003235 ORTHO05D003863 2.9e-25 117.9 58 86.2
THA.LOC104819684 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 2.9e-25 117.9 59 86.4
Ah.01g007750 Amaranthus hybridus HOM05D003235 ORTHO05D003863 3.7e-25 117.5 59 83.1
arahy.Tifrunner.gnm1.ann1.5A4VTA Arachis hypogaea HOM05D003235 ORTHO05D003863 3.7e-25 117.5 58 87.9
arahy.Tifrunner.gnm1.ann1.MB0JZI Arachis hypogaea HOM05D003235 ORTHO05D003863 3.7e-25 117.5 58 87.9
Gohir.A04G125200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 3.7e-25 117.5 59 86.4
Gohir.D04G170000 Gossypium hirsutum HOM05D003235 ORTHO05D003863 3.7e-25 117.5 59 86.4
Gorai.012G158300 Gossypium raimondii HOM05D003235 ORTHO05D003863 3.7e-25 117.5 59 86.4
Lj6g0023552 Lotus japonicus HOM05D003235 ORTHO05D003863 3.7e-25 117.5 56 89.3
PSO541G0846 Papaver somniferum HOM05D003235 ORTHO05D003863 3.7e-25 117.5 57 86.0
PSO675G5274 Papaver somniferum HOM05D003235 ORTHO05D003863 3.7e-25 117.5 57 86.0
PGR042G2488 Punica granatum HOM05D003235 ORTHO05D003863 3.7e-25 117.5 59 84.7
TAR627G1023 Trochodendron aralioides HOM05D003235 ORTHO05D003863 3.7e-25 117.5 57 89.5
ATR1159G019 Amborella trichopoda HOM05D003235 ORTHO05D003863 4.9e-25 117.1 60 81.7
Cc08_g00700 Coffea canephora HOM05D003235 ORTHO05D003863 4.9e-25 117.1 59 83.1
Rhsim05G0048800 Rhododendron simsii HOM05D003235 ORTHO05D003863 4.9e-25 117.1 59 88.1
VMungo1215G3112 Vigna mungo HOM05D003235 ORTHO05D003863 4.9e-25 117.1 59 83.1
Ca_25919_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 6.4e-25 116.7 58 82.8
Ciclev10028672m.g Citrus clementina HOM05D003235 ORTHO05D003863 6.4e-25 116.7 59 84.7
vmacro09726 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 6.4e-25 116.7 59 86.4
EL10Ac9g21270 Beta vulgaris HOM05D003235 ORTHO05D003863 8.3e-25 116.3 59 81.4
Lsat_1_v5_gn_8_120260 Lactuca sativa HOM05D003235 ORTHO05D003863 8.3e-25 116.3 59 89.8
Mapoly0113s0056 Marchantia polymorpha HOM05D003235 ORTHO05D003863 8.3e-25 116.3 59 81.4
Ah.01g023630 Amaranthus hybridus HOM05D003235 ORTHO05D003863 1.1e-24 115.9 58 81.0
Cpa.g.sc20.187 Carica papaya HOM05D003235 ORTHO05D003863 1.1e-24 115.9 59 83.1
Medtr4g127910 Medicago truncatula HOM05D003235 ORTHO05D003863 1.1e-24 115.9 58 82.8
Phvul.003G022900 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 1.1e-24 115.9 59 81.4
TWI31G0863 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 1.1e-24 115.9 59 83.1
HPP92_017619 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.1e-24 115.9 60 83.3
VMungo0251G0657 Vigna mungo HOM05D003235 ORTHO05D003863 1.4e-24 115.5 57 84.2
Medtr2g438210 Medicago truncatula HOM05D003235 ORTHO05D003863 1.8e-24 115.2 58 82.8
Phvul.002G191600 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 1.8e-24 115.2 57 82.5
Eucgr.I01507 Eucalyptus grandis HOM05D003235 ORTHO05D003863 3.2e-24 114.4 58 86.2
Glyma.05G131100 Glycine max HOM05D003235 ORTHO05D003863 4.1e-24 114.0 57 86.0
Glyma.08G085800 Glycine max HOM05D003235 ORTHO05D003863 4.1e-24 114.0 57 86.0
Sc14g0002390 Simmondsia chinensis HOM05D003235 ORTHO05D003863 4.1e-24 114.0 58 81.0
Gohir.A03G209200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 5.4e-24 113.6 57 87.7
Mapoly0005s0123 Marchantia polymorpha HOM05D003235 ORTHO05D003863 7.0e-24 113.2 60 75.0
Hund00347 Selenicereus undatus HOM05D003235 ORTHO05D003863 9.2e-24 112.8 58 82.8
Cc09_g10610 Coffea canephora HOM05D003235 ORTHO05D003863 2.0e-23 111.7 59 79.7
vmacro20582 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.0e-23 111.7 60 85.0
vmacro02322 Vaccinium macrocarpon HOM05D003235 ORTHO05D017489 2.7e-23 111.3 57 82.5
Eucgr.G01836 Eucalyptus grandis HOM05D003235 ORTHO05D003863 3.5e-23 110.9 59 78.0
Pp3c11_26030 Physcomitrium patens HOM05D003235 ORTHO05D003863 1.3e-22 109.0 59 78.0
Actinidia18009 Actinidia chinensis HOM05D003235 ORTHO05D003863 2.3e-22 108.2 56 89.3
SMO164G0177 Selaginella moellendorffii HOM05D003235 ORTHO05D003863 3.0e-22 107.8 57 82.5
CDE05G0254 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 5.0e-22 107.1 50 90.0
arahy.Tifrunner.gnm1.ann1.0G9KRE Arachis hypogaea HOM05D003235 ORTHO05D003863 8.6e-22 106.3 56 83.9
FAN04G0585 Fragaria x ananassa HOM05D003235 ORTHO05D003863 8.6e-22 106.3 69 69.6
arahy.Tifrunner.gnm1.ann1.S5QGNM Arachis hypogaea HOM05D003235 ORTHO05D003863 1.1e-21 105.9 56 82.1
TPR.G8545 Trifolium pratense HOM05D003235 ORTHO05D003863 1.5e-21 105.5 55 80.0
CBR_g18671 Chara braunii HOM05D003235 ORTHO05D003863 2.8e-20 101.3 60 68.3
SHI05839 Sapria himalayana HOM05D003235 ORTHO05D003863 2.6e-18 94.7 41 87.8
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 9.8e-18 92.8 42 88.1
AagrBONN_evm.TU.Sc2ySwM_344.5027 Anthoceros agrestis HOM05D003235 ORTHO05D003863 3.7e-17 90.9 47 78.7
Cre06.g273250 Chlamydomonas reinhardtii HOM05D003235 ORTHO05D003863 8.3e-17 89.7 60 61.7
vmacro17286 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.0e-15 85.1 42 83.3
PGSC0003DMG400018636 Solanum tuberosum HOM05D003235 ORTHO05D003863 3.0e-14 81.3 37 86.5
PRCOL_00006733 Prasinoderma coloniale HOM05D003235 ORTHO05D003863 5.0e-14 80.5 60 55.0
MCO05G004 Micromonas commoda HOM05D003235 ORTHO05D003863 1.9e-13 78.6 56 55.4
TPR.G30239 Trifolium pratense HOM05D003235 ORTHO05D017489 1.9e-13 78.6 67 53.7
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 2.5e-13 78.2 39 82.1
Sabra04G0123300 Salix brachista HOM05D003235 ORTHO05D003863 9.5e-13 76.3 38 81.6


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