Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 3.9e-51 204.5 104 100.0
ECA236G1425 Erigeron canadensis HOM05D007037 ORTHO05D006691 2.5e-26 122.1 84 78.6
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 2.9e-14 82.0 80 56.2
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.6e-12 76.3 87 54.0
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 4.6e-12 74.7 87 55.2
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 6.7e-11 70.9 79 57.0
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.1e-10 70.1 79 53.2
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 1.1e-10 70.1 76 51.3
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 7.4e-10 67.4 76 46.1
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.3e-09 66.6 76 47.4
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.7e-09 66.2 76 44.7
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.8e-09 65.5 82 46.3
CiPaw.03G159600 Carya illinoinensis HOM05D007037 ORTHO05D006691 2.8e-09 65.5 75 54.7
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 3.7e-09 65.1 81 43.2
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 4.8e-09 64.7 77 45.5
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 8.2e-09 63.9 80 43.8
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 8.2e-09 63.9 81 49.4
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 8.2e-09 63.9 77 46.8
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 8.2e-09 63.9 90 50.0
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 1.4e-08 63.2 70 51.4
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 1.4e-08 63.2 82 45.1
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.4e-08 63.2 102 37.3
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.4e-08 62.4 80 43.8
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 2.4e-08 62.4 77 44.2
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.4e-08 62.4 77 44.2
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.1e-08 62.0 83 48.2
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 4.1e-08 61.6 83 42.2
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 9.1e-08 60.5 76 44.7
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.2e-07 60.1 82 43.9
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.2e-07 60.1 82 42.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 2.0e-07 59.3 75 45.3
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 3.4e-07 58.5 80 41.2
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 3.4e-07 58.5 87 42.5
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 4.5e-07 58.2 82 42.7
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 4.5e-07 58.2 82 42.7
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 5.9e-07 57.8 76 42.1
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 5.9e-07 57.8 77 44.2
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.0e-06 57.0 78 41.0
Lj8E125T3 Lonicera japonica HOM05D009550 ORTHO05D006691 1.7e-06 56.2 69 49.3
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 2.2e-06 55.8 80 38.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.0e-06 54.7 76 44.7
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 6.5e-06 54.3 86 39.5
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 6.5e-06 54.3 78 44.9


User provided reference genes

Program Settings