Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 0.0e+00 1426.8 709 100.0
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 2.4e-277 958.7 674 72.6
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.2e-276 956.4 699 70.4
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 7.8e-236 820.8 664 61.9
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 2.2e-230 802.7 694 61.4
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 9.6e-226 787.3 683 59.9
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 3.6e-225 785.4 701 59.5
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 2.2e-222 776.2 676 58.9
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 3.8e-222 775.4 688 58.9
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 9.3e-221 770.8 665 60.2
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 5.1e-219 765.0 650 60.0
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 3.3e-218 762.3 670 58.2
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 1.3e-217 760.4 621 61.8
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.1e-216 757.3 687 57.5
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 5.3e-216 755.0 675 59.1
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 2.6e-215 752.7 648 60.8
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 2.6e-215 752.7 685 56.8
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 4.5e-215 751.9 691 58.0
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.2e-212 743.8 688 57.4
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 1.3e-211 740.3 674 56.7
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 2.3e-211 739.6 680 57.2
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 3.0e-211 739.2 668 57.9
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 5.1e-211 738.4 705 55.5
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 5.1e-211 738.4 696 56.0
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 4.3e-210 735.3 675 57.0
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 9.6e-210 734.2 689 56.5
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.3e-209 733.8 687 57.2
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.8e-209 732.6 688 57.1
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 4.8e-209 731.9 675 57.2
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 1.8e-208 729.9 685 56.4
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 4.0e-208 728.8 691 55.7
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 1.2e-207 727.2 688 54.2
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 3.4e-207 725.7 680 55.7
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 3.5e-204 715.7 681 53.3
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 1.0e-203 714.1 695 55.4
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 2.3e-203 713.0 669 57.1
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 3.0e-203 712.6 633 57.3
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 5.1e-203 711.8 693 56.0
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 2.1e-201 706.4 680 53.1
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 2.1e-201 706.4 642 56.9
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 3.7e-201 705.7 664 55.6
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.4e-200 703.7 677 54.9
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.8e-200 703.4 643 55.5
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 2.0e-199 699.9 652 55.2
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 3.4e-199 699.1 682 53.1
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.0e-198 697.6 663 55.7
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 2.2e-198 696.4 683 53.0
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 3.8e-198 695.7 691 53.0
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 6.5e-198 694.9 679 52.6
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 6.5e-198 694.9 669 53.4
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 2.5e-197 693.0 668 53.9
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 2.5e-197 693.0 686 52.0
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 3.2e-197 692.6 691 54.3
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 4.2e-197 692.2 674 53.6
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 5.5e-197 691.8 657 54.3
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 1.6e-196 690.3 698 51.4
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 3.5e-196 689.1 680 53.2
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 6.0e-196 688.3 689 53.7
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 7.9e-196 688.0 689 53.7
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 7.9e-196 688.0 679 52.7
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.3e-195 687.2 684 55.3
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 2.3e-195 686.4 681 53.2
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 6.7e-195 684.9 708 52.8
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 1.5e-194 683.7 662 54.7
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.9e-194 683.3 649 53.5
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 7.4e-194 681.4 701 50.6
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 7.4e-194 681.4 726 51.7
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 9.7e-194 681.0 680 52.6
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 9.7e-194 681.0 704 52.1
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 1.4e-192 677.2 666 53.8
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 3.1e-192 676.0 758 48.9
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 6.9e-192 674.9 698 50.6
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 9.0e-192 674.5 706 52.0
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 2.6e-191 672.9 615 57.2
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 5.9e-191 671.8 691 51.5
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.9e-191 671.8 658 54.3
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.3e-190 670.6 721 51.6
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 1.3e-190 670.6 584 58.9
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.3e-190 670.6 663 54.9
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 5.0e-190 668.7 691 51.5
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 1.1e-189 667.5 691 51.4
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.4e-189 667.2 704 52.1
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 3.2e-189 666.0 662 52.9
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 2.7e-188 662.9 691 52.0
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 2.7e-188 662.9 667 52.6
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 3.6e-188 662.5 664 52.4
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 7.9e-188 661.4 699 52.2
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.4e-187 660.6 715 50.9
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 3.0e-187 659.4 696 50.9
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 8.8e-187 657.9 663 53.8
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 5.7e-186 655.2 679 49.3
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 5.7e-186 655.2 610 55.9
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 9.7e-186 654.4 645 54.0
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 5.3e-184 648.7 690 50.3
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 6.9e-184 648.3 631 53.1
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.2e-183 647.5 633 54.5
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 2.0e-183 646.7 663 52.8
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 8.5e-182 641.3 671 52.9
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 5.5e-181 638.6 693 48.9
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 1.6e-180 637.1 639 52.0
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 1.6e-180 637.1 643 52.6
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.1e-180 636.7 699 50.9
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 3.6e-180 636.0 695 49.9
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 6.1e-180 635.2 592 56.2
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 1.0e-179 634.4 685 49.5
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 1.4e-179 634.0 686 52.3
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.0e-179 632.9 672 50.6
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 1.5e-178 630.6 716 50.1
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 8.2e-177 624.8 694 50.9
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 9.1e-176 621.3 636 52.5
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 1.5e-175 620.5 651 51.8
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 4.5e-175 619.0 734 47.8
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 7.2e-173 611.7 718 49.6
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 2.1e-172 610.1 680 47.9
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 1.0e-171 607.8 679 48.5
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 1.8e-171 607.1 562 55.5
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 2.6e-170 603.2 682 48.4
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 2.6e-170 603.2 696 49.1
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 5.7e-170 602.1 682 48.2
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 7.7e-167 591.7 698 49.6
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 8.5e-166 588.2 695 46.9
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 3.2e-165 586.3 689 47.8
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 9.4e-165 584.7 669 49.5
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 2.6e-162 576.6 664 46.5
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.2e-161 573.5 626 50.5
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 4.1e-160 569.3 670 46.6
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 2.2e-158 563.5 610 51.1
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 1.8e-147 527.3 692 44.2
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 2.6e-146 523.5 481 56.3
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 2.0e-143 513.8 468 59.0
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 6.1e-140 502.3 487 53.4
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 9.2e-136 488.4 522 51.7
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 2.0e-135 487.3 747 41.4
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 2.8e-132 476.9 668 42.8
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 2.8e-124 450.3 424 54.7
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 4.7e-124 449.5 497 46.7
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 6.8e-123 445.7 657 41.7
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 9.2e-120 435.3 666 40.4
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 1.3e-118 431.4 670 38.7
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 3.0e-118 430.3 702 39.3
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 5.1e-118 429.5 652 40.5
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 9.9e-114 415.2 666 39.9
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.0e-110 405.2 624 39.4
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 6.9e-107 392.5 403 52.1
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 2.1e-103 380.9 750 34.5
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.5e-101 374.0 670 38.2
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 4.8e-100 369.8 744 35.3
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 7.9e-95 352.4 617 37.4
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 2.3e-94 350.9 659 38.8
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 3.9e-94 350.1 805 32.8
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 4.5e-90 336.7 504 41.5
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 4.6e-87 326.6 744 32.4
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 4.6e-87 326.6 339 49.9
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 3.0e-86 323.9 551 37.9
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 7.2e-80 302.8 521 37.6
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.9e-72 278.1 521 34.4
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 7.2e-72 276.2 307 51.8
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 3.9e-70 270.4 215 60.9
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 8.2e-68 262.7 219 61.6
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 3.0e-62 244.2 333 39.9
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.5e-32 145.6 116 61.2
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.8e-31 141.4 284 33.5
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.8e-30 138.7 192 41.1
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 4.0e-30 137.5 109 59.6
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.2e-21 109.4 109 57.8
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.9e-16 92.0 62 72.6
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 2.1e-15 88.6 70 60.0
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 5.2e-14 84.0 160 38.8
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 2.9e-12 78.2 163 33.7
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 1.4e-11 75.9 52 71.2
DCAR_019433 Daucus carota HOM05D003996 ORTHO05D004665 1.7e-09 68.9 49 69.4
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 3.0e-09 68.2 53 56.6
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 7.3e-08 63.5 51 60.8
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 1.1e-06 59.7 48 60.4


User provided reference genes

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