Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 5.7e-30 133.7 70 100.0
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.2e-24 115.9 66 90.9
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 1.0e-23 112.8 66 87.9
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.8e-23 112.1 66 89.4
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.8e-23 112.1 66 89.4
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.8e-23 112.1 66 89.4
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 2.3e-23 111.7 66 87.9
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 3.9e-23 110.9 66 87.9
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 2.0e-22 108.6 57 98.2
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 1.1e-20 102.8 66 78.8
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 1.1e-20 102.8 66 78.8
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 1.1e-20 102.8 61 86.9
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 1.4e-20 102.4 57 93.0
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.8e-20 102.1 57 91.2
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.8e-20 102.1 57 91.2
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 1.8e-20 102.1 57 91.2
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 3.1e-20 101.3 57 91.2
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-19 99.4 57 91.2
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-19 99.4 57 91.2
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-19 99.4 57 91.2
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.2e-19 99.4 57 91.2
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 2.6e-19 98.2 57 91.2
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 2.6e-19 98.2 57 91.2
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 2.6e-19 98.2 57 91.2
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 2.6e-19 98.2 57 87.7
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 7.7e-19 96.7 57 86.0
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 7.7e-19 96.7 57 86.0
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 1.0e-18 96.3 57 86.0
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 1.0e-18 96.3 57 86.0
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 2.2e-18 95.1 57 84.2
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 2.2e-18 95.1 57 84.2
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 2.2e-18 95.1 57 84.2
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 2.2e-18 95.1 57 84.2
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 3.8e-18 94.4 57 86.0
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 3.8e-18 94.4 56 85.7
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 5.0e-18 94.0 57 87.7
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 5.0e-18 94.0 57 84.2
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 5.0e-18 94.0 57 86.0
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 5.0e-18 94.0 57 84.2
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 6.5e-18 93.6 57 82.5
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 6.5e-18 93.6 57 84.2
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 8.5e-18 93.2 57 82.5
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 8.5e-18 93.2 57 86.0
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 8.5e-18 93.2 57 84.2
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 1.1e-17 92.8 57 87.7
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 1.1e-17 92.8 57 82.5
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 1.1e-17 92.8 57 82.5
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 1.9e-17 92.0 57 84.2
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.9e-17 92.0 57 84.2
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.5e-17 91.7 57 84.2
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 1.6e-16 89.0 55 83.6
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 1.6e-16 89.0 57 78.9
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.7e-16 88.2 56 83.9
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 4.7e-16 87.4 57 78.9
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 8.0e-16 86.7 57 78.9
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.8e-15 85.5 57 77.2
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 2.6e-14 81.6 57 78.9
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 9.7e-14 79.7 57 71.9
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 1.3e-13 79.3 51 86.3
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 3.7e-13 77.8 44 86.4
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 1.1e-12 76.3 57 71.9
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 3.1e-12 74.7 66 59.1
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 3.1e-12 74.7 51 76.5
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 4.1e-12 74.3 58 67.2
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 5.3e-12 73.9 49 77.6
Nitab4.5_0002446g0070 Nicotiana tabacum HOM05D000388 ORTHO05D009843 7.2e-09 63.5 42 83.3
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 2.3e-07 58.5 58 53.4
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 5.2e-07 57.4 28 92.9
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 2.0e-06 55.5 30 86.7


User provided reference genes

Program Settings