Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 9.1e-44 179.9 92 100.0
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 1.4e-28 129.4 91 79.1
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 3.1e-28 128.3 91 76.9
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 7.8e-11 70.5 92 45.7
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 7.8e-11 70.5 95 47.4
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 1.0e-10 70.1 92 46.7
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 1.3e-10 69.7 84 51.2
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.3e-10 69.7 38 81.6
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 2.3e-10 68.9 92 47.8
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 2.3e-10 68.9 94 46.8
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 2.9e-10 68.6 93 48.4
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.8e-10 68.2 92 44.6
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 1.1e-09 66.6 92 47.8
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 1.1e-09 66.6 87 42.5
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 1.5e-09 66.2 93 44.1
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 1.9e-09 65.9 93 47.3
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 2.5e-09 65.5 96 42.7
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 2.5e-09 65.5 93 45.2
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 2.5e-09 65.5 95 50.5
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 4.3e-09 64.7 93 46.2
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 5.6e-09 64.3 93 47.3
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 5.6e-09 64.3 92 44.6
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 5.6e-09 64.3 92 43.5
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 9.5e-09 63.5 94 44.7
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 9.5e-09 63.5 94 46.8
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 9.5e-09 63.5 93 45.2
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 1.2e-08 63.2 95 43.2
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 1.2e-08 63.2 92 47.8
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.6e-08 62.8 94 44.7
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.6e-08 62.8 94 44.7
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 1.6e-08 62.8 94 45.7
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 2.1e-08 62.4 97 46.4
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 2.1e-08 62.4 89 42.7
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.1e-08 62.4 92 44.6
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 2.1e-08 62.4 33 81.8
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.1e-08 62.4 88 43.2
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.1e-08 62.4 88 42.0
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.1e-08 62.4 93 46.2
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 2.1e-08 62.4 92 43.5
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 2.8e-08 62.0 96 41.7
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.8e-08 62.0 93 44.1
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.8e-08 62.0 99 45.5
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.8e-08 62.0 88 43.2
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 2.8e-08 62.0 92 44.6
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 3.6e-08 61.6 34 76.5
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 4.7e-08 61.2 96 42.7
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 6.1e-08 60.8 33 78.8
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 6.1e-08 60.8 92 41.3
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 6.1e-08 60.8 33 81.8
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.1e-08 60.8 88 45.5
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 8.0e-08 60.5 86 44.2
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 8.0e-08 60.5 93 41.9
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 8.0e-08 60.5 96 44.8
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.0e-07 60.1 94 45.7
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.0e-07 60.1 88 40.9
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.0e-07 60.1 92 43.5
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 1.0e-07 60.1 95 44.2
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.4e-07 59.7 65 52.3
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 1.4e-07 59.7 98 41.8
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 1.4e-07 59.7 94 41.5
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 1.4e-07 59.7 88 42.0
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.8e-07 59.3 32 81.2
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 2.3e-07 58.9 95 42.1
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 2.3e-07 58.9 93 40.9
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 4.0e-07 58.2 95 40.0
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 5.2e-07 57.8 96 44.8
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 6.8e-07 57.4 92 39.1
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 8.9e-07 57.0 33 75.8
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 8.9e-07 57.0 92 42.4
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 1.5e-06 56.2 100 42.0
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.0e-06 55.8 92 38.0
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.0e-06 55.8 98 41.8
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 2.6e-06 55.5 92 37.0
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 2.6e-06 55.5 91 41.8
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 3.4e-06 55.1 92 37.0
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.4e-06 54.7 92 38.0
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 5.7e-06 54.3 47 59.6
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 7.5e-06 53.9 50 52.0
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 9.8e-06 53.5 42 59.5
ECA236G2451 Erigeron canadensis HOM05D001345 ORTHO05D001190 9.8e-06 53.5 62 56.5
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 9.8e-06 53.5 99 37.4


User provided reference genes

Program Settings