Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 1.1e-66 256.5 132 100.0
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 7.4e-31 137.5 143 59.4
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 6.3e-22 107.8 146 52.1
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 1.0e-19 100.5 140 49.3
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 2.2e-19 99.4 138 47.8
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 5.0e-19 98.2 123 55.3
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.2e-18 95.1 139 49.6
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.2e-18 95.1 139 49.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 9.4e-18 94.0 106 58.5
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.2e-17 93.6 141 43.3
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 4.7e-17 91.7 137 46.7
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 6.1e-17 91.3 147 44.2
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 6.1e-17 91.3 142 47.9
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.3e-15 85.5 141 44.7
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.4e-15 85.1 141 44.7
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 5.7e-15 84.7 142 45.8
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 2.8e-14 82.4 140 42.1
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 2.8e-14 82.4 142 47.2
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 3.7e-14 82.0 143 42.7
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 6.3e-14 81.3 141 46.8
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 6.3e-14 81.3 145 46.9
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.1e-13 80.5 104 47.1
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.1e-13 80.5 105 48.6
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 1.8e-13 79.7 135 43.0
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 2.4e-13 79.3 108 48.1
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 5.3e-13 78.2 124 46.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 9.1e-13 77.4 148 43.9
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.2e-12 77.0 136 41.9
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.6e-12 75.9 145 47.6
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 2.6e-12 75.9 141 43.3
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 3.5e-12 75.5 145 46.9
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 3.5e-12 75.5 139 43.9
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 4.5e-12 75.1 128 42.2
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 5.9e-12 74.7 134 38.8
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 7.7e-12 74.3 110 47.3
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 7.7e-12 74.3 146 39.7
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.0e-11 73.9 121 42.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 1.0e-11 73.9 142 43.7
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.7e-11 73.2 110 48.2
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.7e-11 73.2 140 42.9
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 1.7e-11 73.2 114 44.7
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 2.2e-11 72.8 104 43.3
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 2.2e-11 72.8 99 47.5
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.2e-11 72.8 141 42.6
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 2.9e-11 72.4 136 41.9
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.8e-11 72.0 140 42.9
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.8e-11 72.0 116 41.4
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 5.0e-11 71.6 143 42.7
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.5e-11 71.2 140 42.1
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 8.5e-11 70.9 140 40.0
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 8.5e-11 70.9 110 43.6
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 8.5e-11 70.9 100 48.0
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.1e-10 70.5 110 47.3
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.5e-10 69.3 140 42.9
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.2e-10 68.9 110 42.7
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 5.5e-10 68.2 138 41.3
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 1.6e-09 66.6 130 38.5
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 2.7e-09 65.9 134 36.6
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 3.6e-09 65.5 125 40.0
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 6.1e-09 64.7 142 37.3
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 8.0e-09 64.3 110 41.8
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.4e-08 63.5 104 40.4
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 1.4e-08 63.5 127 39.4
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 3.0e-08 62.4 131 35.9
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 8.8e-08 60.8 108 39.8
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 8.8e-08 60.8 108 42.6
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 1.5e-07 60.1 109 45.9
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 2.6e-07 59.3 143 40.6
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 7.5e-07 57.8 118 39.0
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 1.7e-06 56.6 107 37.4
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.8e-06 55.8 117 40.2
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.8e-06 55.1 103 39.8
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 4.8e-06 55.1 103 39.8
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.8e-06 55.1 90 44.4
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 6.3e-06 54.7 144 34.7
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 8.2e-06 54.3 98 42.9
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 8.2e-06 54.3 97 43.3


User provided reference genes

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