Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.9e-168 594.7 304 100.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 6.2e-158 560.8 304 93.8
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 2.6e-148 528.9 300 88.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.6e-132 475.7 304 78.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.2e-131 472.6 304 77.6
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 77.0
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.9e-130 469.5 304 77.3
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 77.0
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 4.2e-130 468.4 304 77.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.6e-129 466.5 304 76.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 6.1e-129 464.5 304 76.6
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 76.6
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.4e-128 463.4 303 75.9
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.3e-128 462.6 304 75.0
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 3.9e-128 461.8 304 75.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 8.8e-128 460.7 304 75.7
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.1e-127 460.3 300 76.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.5e-127 459.9 304 76.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.0e-127 459.5 304 75.7
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 2.0e-127 459.5 300 76.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 2.6e-127 459.1 304 76.6
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 75.7
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.4e-127 458.4 304 75.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.4e-127 458.4 302 74.5
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.7e-127 458.0 301 75.4
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 7.4e-127 457.6 304 75.7
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 76.0
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.7e-126 456.4 304 75.0
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.7e-126 456.4 304 75.7
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.2e-126 456.1 304 75.0
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.8e-126 455.7 297 76.8
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.7e-126 455.3 304 75.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 74.7
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 74.7
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.4e-125 452.6 304 75.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.1e-125 452.2 304 74.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 7.0e-125 451.1 304 73.4
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.2e-124 450.3 304 73.4
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.2e-124 450.3 298 75.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.6e-124 449.9 298 75.2
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 2.0e-124 449.5 304 75.7
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.0e-124 449.5 304 73.4
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 5.9e-124 448.0 304 73.7
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 7.7e-124 447.6 304 74.0
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.3e-123 446.8 304 72.4
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.7e-123 446.4 304 73.4
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 74.0
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 74.0
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 3.8e-123 445.3 304 72.7
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 3.8e-123 445.3 304 72.7
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.0e-123 444.9 304 74.0
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.1e-122 443.7 304 73.0
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.9e-122 443.0 304 73.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.2e-122 442.2 304 73.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 5.5e-122 441.4 304 73.0
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 9.4e-122 440.7 304 72.4
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 3.6e-121 438.7 304 72.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 6.1e-121 438.0 304 73.0
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.4e-120 436.8 304 72.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.4e-120 436.8 304 72.0
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.4e-120 436.8 304 72.4
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 5.2e-120 434.9 304 72.4
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 2.6e-119 432.6 304 71.4
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.3e-118 430.3 306 70.3
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.3e-118 430.3 306 70.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.3e-118 430.3 278 77.3
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.8e-118 429.1 300 71.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.8e-118 429.1 306 70.3
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.7e-118 428.7 306 71.6
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 4.8e-118 428.3 306 69.6
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.3e-118 427.6 301 71.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.8e-117 426.4 306 69.6
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.4e-117 426.0 306 69.3
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.1e-117 425.6 300 71.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 4.1e-117 425.2 306 69.9
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.6e-116 423.3 304 69.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 7.7e-116 421.0 303 69.6
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.2e-115 419.5 299 70.9
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 6.5e-115 417.9 288 74.0
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 8.5e-115 417.5 300 70.3
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.9e-114 416.4 300 69.3
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 4.1e-109 398.7 304 68.4
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.0e-109 397.9 262 75.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.1e-105 384.8 304 63.5
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 8.0e-105 384.4 303 63.7
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.8e-104 383.3 303 63.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 4.0e-104 382.1 246 78.9
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.5e-103 380.2 304 62.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.0e-103 379.8 307 63.5
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 6.3e-102 374.8 254 73.6
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.1e-98 364.0 264 70.8
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.1e-93 347.4 242 70.7
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.6e-92 343.6 304 57.6
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.6e-87 326.2 230 70.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.4e-85 318.5 291 56.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.6e-84 317.0 295 59.7
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.6e-84 315.5 271 60.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 5.6e-82 308.5 260 62.7
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.1e-80 304.3 220 70.5
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.4e-80 303.9 300 51.3
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.8e-80 303.5 196 76.5
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.9e-77 293.5 304 49.7
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.8e-72 276.9 296 50.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.9e-69 266.9 202 65.8
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 6.0e-68 261.9 298 50.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.2e-60 237.7 314 41.7
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.5e-60 236.1 214 59.3
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.4e-50 201.8 142 73.2
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.1e-48 196.4 142 73.2
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.3e-46 191.0 313 38.3
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-46 190.7 142 71.1
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 2.7e-44 183.3 303 40.6
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.1e-43 179.1 142 68.3
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 2.8e-41 173.3 164 50.0
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.8e-41 172.6 115 72.2
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.3e-37 158.3 91 79.1
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.3e-33 147.9 366 30.6
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 5.0e-30 136.0 265 37.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 5.5e-29 132.5 315 30.8
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.8e-27 127.5 344 29.7
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.2e-21 106.7 76 65.8
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.3e-14 84.7 54 72.2


User provided reference genes

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