Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 9.2e-128 460.3 243 100.0
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 9.3e-88 327.4 242 72.3
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 7.1e-80 301.2 238 67.2
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 3.0e-78 295.8 225 71.1
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 5.8e-74 281.6 238 62.2
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 5.9e-66 255.0 243 57.6
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.6e-63 246.9 242 52.9
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 2.3e-62 243.0 242 54.5
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 3.1e-59 232.6 245 51.4
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 9.1e-59 231.1 245 51.0
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 9.1e-59 231.1 245 50.6
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 7.7e-58 228.0 238 51.7
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.7e-57 226.9 245 51.4
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.8e-57 225.7 245 51.0
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.8e-57 225.7 242 50.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 5.0e-57 225.3 241 49.4
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.5e-56 223.0 242 50.8
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 4.2e-56 222.2 245 49.4
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.6e-55 220.3 245 49.4
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 2.1e-55 219.9 245 49.0
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.1e-55 219.9 245 49.0
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.7e-55 219.5 244 47.5
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 3.6e-55 219.2 244 47.1
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 1.4e-54 217.2 244 48.4
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.8e-54 216.9 245 49.0
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.9e-54 215.7 245 49.0
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 2.0e-53 213.4 244 48.0
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 2.6e-53 213.0 244 47.5
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 5.7e-53 211.8 242 47.9
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 5.7e-53 211.8 247 49.0
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.3e-52 210.7 243 47.7
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 3.7e-52 209.1 244 48.4
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 2.4e-51 206.5 242 46.7
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 5.3e-51 205.3 244 48.8
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 3.5e-50 202.6 243 48.1
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 7.7e-50 201.4 241 46.9
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 1.3e-49 200.7 245 47.8
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 1.7e-49 200.3 242 45.5
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 2.2e-49 199.9 242 45.9
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 3.8e-49 199.1 240 47.1
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 3.8e-49 199.1 243 45.3
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 5.0e-49 198.7 238 46.2
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.2e-48 195.7 244 46.7
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 5.5e-48 195.3 236 43.2
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 9.4e-48 194.5 239 45.6
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.2e-47 194.1 190 55.3
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 3.9e-46 189.1 246 43.5
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 8.8e-46 188.0 242 44.6
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 2.6e-45 186.4 253 42.7
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 3.3e-45 186.0 178 50.6
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 7.4e-45 184.9 261 42.5
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 9.7e-45 184.5 243 42.8
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 1.7e-44 183.7 235 46.4
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 1.7e-44 183.7 271 41.3
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 4.8e-44 182.2 244 45.1
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 8.2e-44 181.4 249 43.0
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 1.4e-43 180.6 245 42.4
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 1.4e-43 180.6 246 43.1
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.1e-43 177.9 260 44.2
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 1.6e-42 177.2 250 42.8
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 3.5e-42 176.0 246 40.7
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 7.7e-42 174.9 247 40.9
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 2.2e-41 173.3 238 43.3
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 2.9e-41 172.9 247 40.9
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 5.0e-41 172.2 242 41.3
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 5.0e-41 172.2 245 43.7
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 5.0e-41 172.2 245 42.4
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.5e-41 171.8 242 41.3
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 8.5e-41 171.4 239 43.9
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.5e-40 170.6 241 42.7
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 2.5e-40 169.9 250 41.2
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 3.2e-40 169.5 245 42.0
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 3.2e-40 169.5 242 43.0
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.2e-40 169.5 245 40.8
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 5.5e-40 168.7 237 40.9
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 5.5e-40 168.7 247 41.7
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 7.2e-40 168.3 249 43.0
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 1.2e-39 167.5 246 39.4
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.2e-39 167.5 249 43.0
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 1.2e-39 167.5 245 40.0
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 1.6e-39 167.2 242 40.9
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 6.1e-39 165.2 254 41.3
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 2.6e-37 159.8 225 40.4
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 2.2e-36 156.8 240 39.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 1.1e-35 154.5 259 39.8
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 2.4e-35 153.3 209 41.1
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 7.0e-35 151.8 209 40.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.6e-34 150.6 254 39.4
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 8.5e-33 144.8 236 40.3
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 1.1e-32 144.4 179 43.0
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 5.5e-32 142.1 237 38.0
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 9.4e-32 141.4 245 36.7
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 1.2e-31 141.0 183 44.8
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 2.1e-31 140.2 239 38.5
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 6.1e-31 138.7 248 37.9
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 8.0e-31 138.3 249 38.2
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 3.4e-29 132.9 246 35.4
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 1.3e-28 131.0 202 40.1
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 6.3e-28 128.6 170 48.2
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.0e-26 123.6 186 43.0
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 1.0e-25 121.3 137 47.4
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 3.6e-23 112.8 213 38.5
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 4.7e-23 112.5 192 35.9
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 2.3e-22 110.2 243 35.4
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 8.9e-22 108.2 76 64.5
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 1.1e-19 101.3 204 32.8
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 5.0e-17 92.4 145 43.4
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 5.0e-17 92.4 156 35.9
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.1e-16 91.3 60 70.0
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 1.0e-14 84.7 140 40.0
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 4.0e-14 82.8 196 30.1
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 6.8e-14 82.0 136 38.2
HanXRQChr03g0087041 Helianthus annuus HOM05D000778 ORTHO05D000601 6.8e-14 82.0 49 89.8
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 2.6e-13 80.1 64 57.8
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 3.5e-10 69.7 148 27.0
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 6.0e-10 68.9 41 70.7
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 2.3e-09 67.0 104 42.3
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.1e-08 64.7 39 69.2
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 2.1e-07 60.5 48 58.3


User provided reference genes

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