Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 8.8e-75 283.5 139 100.0
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 3.1e-35 152.1 118 65.3
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.1e-32 143.7 121 66.9
HanXRQChr02g0051071 Helianthus annuus HOM05D004108 ORTHO05D017056 1.6e-23 113.2 84 70.2
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 8.4e-17 90.9 134 43.3
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.7e-15 85.9 129 42.6
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 3.5e-15 85.5 133 42.9
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 6.0e-15 84.7 122 45.1
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 7.8e-15 84.3 139 37.4
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 5.1e-14 81.6 131 39.7
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 6.6e-14 81.3 119 43.7
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 3.3e-13 79.0 129 43.4
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 5.6e-13 78.2 128 39.1
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.3e-12 77.0 132 37.1
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 1.3e-12 77.0 117 41.9
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.6e-12 76.6 134 38.8
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.1e-12 76.3 139 40.3
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 2.8e-12 75.9 124 38.7
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 3.6e-12 75.5 129 39.5
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 3.6e-12 75.5 128 39.1
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 6.2e-12 74.7 139 40.3
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 6.2e-12 74.7 124 39.5
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 8.1e-12 74.3 124 41.9
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 8.1e-12 74.3 135 41.5
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.1e-12 74.3 135 38.5
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.1e-12 74.3 135 38.5
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 8.1e-12 74.3 135 38.5
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 1.4e-11 73.6 124 39.5
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 1.4e-11 73.6 134 40.3
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.4e-11 73.6 131 42.0
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 1.4e-11 73.6 124 38.7
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 2.4e-11 72.8 133 38.3
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 3.1e-11 72.4 134 38.8
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 3.1e-11 72.4 130 38.5
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 4.0e-11 72.0 132 37.1
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 4.0e-11 72.0 131 39.7
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 4.0e-11 72.0 118 40.7
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.0e-11 72.0 130 41.5
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 4.0e-11 72.0 126 41.3
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 5.3e-11 71.6 148 35.8
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 6.9e-11 71.2 132 37.1
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 6.9e-11 71.2 130 38.5
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.9e-11 71.2 130 40.8
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 9.0e-11 70.9 131 38.2
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 9.0e-11 70.9 130 40.8
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 9.0e-11 70.9 137 38.0
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 9.0e-11 70.9 128 42.2
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 1.2e-10 70.5 137 39.4
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 1.2e-10 70.5 135 40.7
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.5e-10 70.1 129 39.5
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 2.0e-10 69.7 135 37.0
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.6e-10 69.3 133 36.8
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 2.6e-10 69.3 144 36.8
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.4e-10 68.9 132 36.4
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 4.4e-10 68.6 129 36.4
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 5.8e-10 68.2 133 38.3
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 7.6e-10 67.8 141 31.9
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 7.6e-10 67.8 131 38.2
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 7.6e-10 67.8 130 36.2
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.3e-09 67.0 124 36.3
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.3e-09 67.0 127 37.0
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.7e-09 66.6 127 37.0
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 1.7e-09 66.6 122 35.2
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 2.2e-09 66.2 146 35.6
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.2e-09 66.2 129 35.7
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 2.2e-09 66.2 132 36.4
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.2e-09 66.2 127 37.0
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.2e-09 66.2 127 37.0
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 3.8e-09 65.5 131 35.9
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 4.9e-09 65.1 125 39.2
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 6.4e-09 64.7 122 41.0
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 8.4e-09 64.3 144 35.4
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.1e-08 63.9 133 36.1
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 1.1e-08 63.9 137 32.8
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 1.1e-08 63.9 134 37.3
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 1.4e-08 63.5 129 34.1
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 1.4e-08 63.5 129 34.1
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 1.4e-08 63.5 117 40.2
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.4e-08 63.5 123 40.7
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 1.9e-08 63.2 131 35.1
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 2.4e-08 62.8 125 42.4
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 2.4e-08 62.8 118 33.1
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 3.2e-08 62.4 130 39.2
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 3.2e-08 62.4 117 39.3
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 4.2e-08 62.0 119 36.1
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 5.4e-08 61.6 133 36.8
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 9.3e-08 60.8 133 36.1
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.2e-07 60.5 117 39.3
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.2e-07 60.5 148 35.8
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 1.6e-07 60.1 107 37.4
HanXRQChr02g0051041 Helianthus annuus HOM05D014111 ORTHO05D017056 1.6e-07 60.1 39 74.4
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 2.1e-07 59.7 136 35.3
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.1e-07 59.7 127 35.4
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 2.1e-07 59.7 140 32.9
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 2.1e-07 59.7 127 34.6
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 2.7e-07 59.3 140 32.1
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 2.7e-07 59.3 144 34.7
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 2.7e-07 59.3 121 35.5
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 3.5e-07 58.9 115 41.7
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.5e-07 58.9 133 33.1
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 4.6e-07 58.5 115 35.7
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 4.6e-07 58.5 145 31.7
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 4.6e-07 58.5 115 39.1
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 6.0e-07 58.2 123 35.0
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 7.9e-07 57.8 123 35.8
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.0e-06 57.4 147 32.0
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.0e-06 57.4 146 34.2
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.3e-06 57.0 115 37.4
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 1.3e-06 57.0 121 31.4
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 1.7e-06 56.6 110 35.5
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 2.3e-06 56.2 115 36.5
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 2.3e-06 56.2 116 34.5
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 3.0e-06 55.8 115 38.3
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 3.0e-06 55.8 147 32.7
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 3.0e-06 55.8 98 40.8
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 3.0e-06 55.8 135 34.1
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.9e-06 55.5 149 29.5
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 5.1e-06 55.1 145 29.7
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 6.6e-06 54.7 119 31.9
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 6.6e-06 54.7 133 33.8
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 6.6e-06 54.7 115 37.4
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 6.6e-06 54.7 115 37.4
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 8.7e-06 54.3 134 32.1


User provided reference genes

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