Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 2.3e-99 365.5 184 100.0
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.4e-75 286.6 189 79.4
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 4.0e-75 285.0 190 77.4
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.0e-50 203.0 194 57.2
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 5.8e-50 201.4 175 64.0
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.3e-49 200.3 179 62.6
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.7e-49 199.9 177 63.3
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 2.9e-49 199.1 189 57.7
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 2.9e-49 199.1 193 56.0
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 3.8e-49 198.7 189 57.7
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 8.4e-49 197.6 185 57.3
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.1e-48 197.2 189 57.7
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 1.9e-48 196.4 180 59.4
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 5.4e-48 194.9 193 55.4
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 5.4e-48 194.9 177 61.0
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 7.1e-48 194.5 177 59.9
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 9.3e-48 194.1 174 59.8
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 2.1e-47 193.0 176 59.7
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 2.7e-47 192.6 186 53.8
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 4.6e-47 191.8 177 60.5
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.0e-47 191.4 193 55.4
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 6.0e-47 191.4 175 58.3
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 7.9e-47 191.0 177 58.8
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 7.9e-47 191.0 179 58.1
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 7.9e-47 191.0 195 53.8
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.8e-46 189.9 163 62.0
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 3.0e-46 189.1 183 54.1
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 5.1e-46 188.3 185 54.1
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 6.7e-46 188.0 166 59.6
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 8.7e-46 187.6 188 55.3
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 1.1e-45 187.2 164 59.8
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.5e-45 186.8 176 58.0
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.9e-45 186.4 173 57.2
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 1.9e-45 186.4 178 57.3
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.5e-45 186.0 175 60.0
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 3.3e-45 185.7 195 52.8
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 4.3e-45 185.3 193 51.8
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 5.6e-45 184.9 164 59.1
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 7.4e-45 184.5 170 60.6
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 7.4e-45 184.5 184 54.3
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 7.4e-45 184.5 184 54.3
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 9.6e-45 184.1 184 54.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 1.3e-44 183.7 165 58.2
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.3e-44 183.7 178 54.5
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 1.3e-44 183.7 164 57.9
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.6e-44 183.3 175 58.9
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.8e-44 182.6 162 58.6
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 6.2e-44 181.4 179 54.7
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 6.2e-44 181.4 176 54.0
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 8.1e-44 181.0 177 58.2
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 8.1e-44 181.0 179 53.6
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 5.3e-43 178.3 203 51.2
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 6.9e-43 177.9 237 46.4
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 6.9e-43 177.9 178 52.8
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 9.0e-43 177.6 178 56.2
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 9.0e-43 177.6 196 50.5
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.5e-42 176.8 172 54.7
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.0e-42 176.4 164 56.7
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 3.4e-42 175.6 174 54.6
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.4e-42 175.6 215 48.8
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 4.5e-42 175.3 164 56.1
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 5.8e-42 174.9 177 55.4
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.9e-41 172.6 175 52.6
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 6.5e-41 171.4 165 53.9
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.1e-40 170.6 190 49.5
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 1.4e-40 170.2 173 55.5
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.4e-40 170.2 190 48.9
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 1.9e-40 169.9 180 51.7
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 5.5e-40 168.3 173 51.4
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 2.1e-39 166.4 179 52.0
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 2.7e-39 166.0 158 55.1
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 4.6e-39 165.2 180 50.0
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 1.0e-38 164.1 180 52.2
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 3.9e-38 162.2 178 50.0
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 5.1e-38 161.8 177 50.8
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 1.1e-37 160.6 179 50.8
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 7.4e-37 157.9 188 46.8
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 4.8e-36 155.2 158 53.2
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 8.2e-36 154.5 175 49.1
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.7e-33 146.7 171 46.8
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 6.5e-33 144.8 156 49.4
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.1e-32 144.1 182 44.0
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.9e-32 143.3 177 46.3
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.5e-32 142.9 176 48.9
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 3.2e-32 142.5 173 46.8
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 3.2e-32 142.5 142 52.8
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 7.2e-32 141.4 173 47.4
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 7.2e-32 141.4 156 48.7
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 9.3e-32 141.0 169 46.7
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.1e-31 139.8 169 46.7
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.1e-31 139.8 169 46.7
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.7e-31 139.4 169 45.6
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 3.5e-31 139.0 170 45.9
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 6.1e-31 138.3 169 45.6
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 6.1e-31 138.3 169 45.6
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.3e-30 137.1 171 45.6
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 3.0e-30 136.0 171 44.4
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 5.1e-30 135.2 156 45.5
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.1e-29 134.0 171 45.0
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.9e-29 133.3 161 44.7
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 7.4e-29 131.3 172 44.2
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 1.6e-28 130.2 172 43.6
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 1.6e-28 130.2 120 57.5
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 3.1e-27 125.9 128 50.8
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 1.5e-26 123.6 127 56.7
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-25 119.4 157 43.3
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 3.8e-25 119.0 165 43.0
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 4.2e-24 115.5 169 40.2
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 3.0e-22 109.4 85 61.2
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 2.8e-20 102.8 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 1.5e-18 97.1 184 35.9
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 3.2e-16 89.4 170 37.1
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 2.1e-15 86.7 175 34.3
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 3.6e-15 85.9 197 32.0
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 6.1e-15 85.1 98 51.0
ECA233G1316 Erigeron canadensis HOM05D052542 ORTHO05D008391 4.0e-06 55.8 36 66.7


User provided reference genes

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