Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 3.2e-73 278.5 156 100.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 7.2e-17 91.3 50 80.0
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.0e-15 87.4 137 46.0
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 1.8e-15 86.7 116 47.4
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 3.9e-15 85.5 86 51.2
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 7.4e-14 81.3 109 41.3
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 3.7e-13 79.0 73 54.8
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 2.4e-12 76.3 97 47.4
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 5.3e-12 75.1 46 71.7
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.2e-11 73.9 138 43.5
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.2e-11 73.9 48 72.9
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 1.6e-11 73.6 47 70.2
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.6e-11 72.8 44 72.7
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 4.5e-11 72.0 46 67.4
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 4.5e-11 72.0 50 64.0
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.7e-11 71.2 117 41.9
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.7e-11 71.2 117 41.9
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.3e-10 70.5 110 40.0
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.3e-10 70.5 46 65.2
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 1.7e-10 70.1 153 44.4
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 2.9e-10 69.3 143 37.1
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 2.9e-10 69.3 47 61.7
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 2.9e-10 69.3 46 65.2
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 3.8e-10 68.9 128 39.1
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 5.0e-10 68.6 49 65.3
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 5.0e-10 68.6 153 43.8
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 6.5e-10 68.2 43 67.4
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.1e-09 67.4 80 47.5
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 1.1e-09 67.4 47 61.7
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.1e-09 67.4 109 39.4
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 1.1e-09 67.4 50 62.0
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 1.5e-09 67.0 47 66.0
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.5e-09 67.0 39 74.4
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.9e-09 66.6 41 68.3
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.9e-09 66.6 41 68.3
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.9e-09 66.6 50 64.0
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 3.2e-09 65.9 49 63.3
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 5.5e-09 65.1 123 47.2
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 5.5e-09 65.1 133 35.3
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.2e-08 63.9 83 45.8
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.1e-08 63.2 131 38.9
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 2.1e-08 63.2 50 62.0
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 2.1e-08 63.2 88 44.3
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 2.1e-08 63.2 43 65.1
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 3.6e-08 62.4 47 63.8
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.6e-08 62.4 47 61.7
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.6e-08 62.4 47 63.8
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 4.7e-08 62.0 115 46.1
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 1.0e-07 60.8 42 64.3
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.4e-07 60.5 47 63.8
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.8e-07 60.1 46 58.7
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.8e-07 60.1 42 69.0
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.8e-07 60.1 42 69.0
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 1.8e-07 60.1 42 61.9
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.3e-07 59.7 34 76.5
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 2.3e-07 59.7 51 60.8
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 4.0e-07 58.9 81 48.1
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 5.2e-07 58.5 46 52.2
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 5.2e-07 58.5 43 58.1
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 6.7e-07 58.2 137 36.5
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 6.7e-07 58.2 46 52.2
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.2e-06 57.4 69 43.5
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.2e-06 57.4 41 68.3
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 2.0e-06 56.6 132 37.9
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 2.6e-06 56.2 43 58.1
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 3.3e-06 55.8 32 75.0
Lsat_1_v5_gn_4_90400 Lactuca sativa HOM05D007722 ORTHO05D009730 3.3e-06 55.8 71 50.7
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.3e-06 55.8 86 39.5


User provided reference genes

Program Settings