Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 5.0e-75 284.6 176 100.0
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 1.1e-45 187.2 180 76.7
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 8.6e-43 177.6 178 76.4
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 7.3e-26 121.3 178 59.0
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.2e-25 120.6 176 63.1
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 2.1e-25 119.8 174 60.9
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 3.6e-25 119.0 175 49.7
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 3.6e-25 119.0 176 61.4
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 4.7e-25 118.6 179 55.3
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 4.7e-25 118.6 173 42.2
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.4e-24 117.1 173 51.4
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.8e-24 116.7 174 60.9
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 3.1e-24 115.9 174 44.3
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 4.0e-24 115.5 177 60.5
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 5.2e-24 115.2 175 55.4
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 5.2e-24 115.2 180 61.1
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 5.2e-24 115.2 173 60.7
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 6.9e-24 114.8 176 51.1
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 2.6e-23 112.8 182 54.9
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 7.6e-23 111.3 180 58.9
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 9.9e-23 110.9 173 52.0
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 9.9e-23 110.9 178 51.1
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.8e-22 109.0 176 50.6
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.8e-22 109.0 173 59.0
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.4e-22 108.2 173 59.0
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.4e-22 108.2 173 59.0
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 8.4e-22 107.8 178 57.3
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 8.4e-22 107.8 175 55.4
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 1.1e-21 107.5 183 56.8
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.9e-21 106.7 177 55.9
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.9e-21 106.7 179 55.3
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 5.4e-21 105.1 176 57.4
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.2e-20 104.0 174 55.7
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.1e-20 103.2 177 56.5
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.1e-20 103.2 173 54.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 2.7e-20 102.8 177 48.0
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.5e-20 102.4 172 57.6
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 4.6e-20 102.1 180 53.3
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 4.6e-20 102.1 174 55.2
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-20 102.1 177 52.5
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 6.0e-20 101.7 176 46.6
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 7.8e-20 101.3 183 53.0
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.0e-19 100.9 180 55.0
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.3e-19 100.5 173 45.7
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 1.3e-19 100.5 175 56.6
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.7e-19 100.1 178 42.1
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 1.7e-19 100.1 178 54.5
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-19 100.1 177 53.7
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-19 100.1 173 39.9
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 2.3e-19 99.8 177 49.2
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.3e-19 99.8 180 53.9
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 3.0e-19 99.4 183 52.5
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.9e-19 99.0 173 39.3
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 5.1e-19 98.6 181 51.4
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.1e-18 97.4 173 37.0
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.1e-18 97.4 175 48.6
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-18 97.1 173 37.0
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 1.5e-18 97.1 173 55.5
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.3e-18 95.5 173 38.2
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 4.3e-18 95.5 173 55.5
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 5.6e-18 95.1 178 51.7
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 5.6e-18 95.1 178 51.7
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 7.3e-18 94.7 186 46.2
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 7.3e-18 94.7 173 49.1
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.3e-17 94.0 125 47.2
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.6e-17 93.6 176 47.7
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 1.6e-17 93.6 177 55.9
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 2.1e-17 93.2 174 53.4
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.1e-17 93.2 177 51.4
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 2.8e-17 92.8 186 50.5
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 2.8e-17 92.8 125 61.6
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.6e-17 92.4 183 36.6
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 4.8e-17 92.0 175 37.1
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 4.8e-17 92.0 175 37.1
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 4.8e-17 92.0 125 50.4
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 4.8e-17 92.0 178 54.5
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 6.2e-17 91.7 176 47.7
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 6.2e-17 91.7 173 35.8
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.1e-16 90.9 173 35.8
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.1e-16 90.9 182 39.0
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.4e-16 90.5 125 64.8
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.4e-16 89.7 165 51.5
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 3.1e-16 89.4 177 36.7
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-16 89.4 200 43.5
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 4.0e-16 89.0 173 55.5
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 5.3e-16 88.6 171 36.3
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.3e-16 88.6 132 59.8
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 5.3e-16 88.6 175 53.1
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.2e-15 87.4 200 44.0
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.0e-15 86.7 177 52.0
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.6e-15 86.3 173 52.0
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 2.6e-15 86.3 170 54.1
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.6e-15 86.3 165 55.8
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 2.6e-15 86.3 170 54.1
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 3.4e-15 85.9 183 53.6
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 4.5e-15 85.5 178 48.3
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 7.6e-15 84.7 175 43.4
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 9.9e-15 84.3 174 52.9
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 1.7e-14 83.6 173 33.5
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.7e-14 83.6 179 49.2
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 2.2e-14 83.2 175 52.0
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 2.9e-14 82.8 90 80.0
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 4.9e-14 82.0 173 34.1
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 6.4e-14 81.6 182 53.3
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 6.4e-14 81.6 167 33.5
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 8.4e-14 81.3 172 33.1
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 8.4e-14 81.3 172 33.1
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 8.4e-14 81.3 170 33.5
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.1e-13 80.9 172 34.3
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.1e-13 80.9 172 34.3
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.1e-13 80.9 172 34.3
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 3.2e-13 79.3 173 49.7
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 4.2e-13 79.0 122 42.6
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 9.3e-13 77.8 189 49.2
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 9.3e-13 77.8 175 37.1
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.2e-12 77.4 176 35.2
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.2e-12 77.4 91 41.8
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.2e-12 77.4 123 37.4
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.6e-12 77.0 184 46.7
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.1e-12 76.6 176 33.0
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 2.7e-12 76.3 185 34.1
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.0e-11 74.3 172 34.9
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 2.3e-11 73.2 129 38.0
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 3.9e-11 72.4 121 41.3
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 1.9e-10 70.1 176 46.0
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 5.6e-10 68.6 174 45.4
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 7.4e-10 68.2 129 35.7
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 9.6e-10 67.8 119 40.3
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 9.6e-10 67.8 95 69.5
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.3e-09 67.4 179 46.4
Lsat_1_v5_gn_1_28901 Lactuca sativa HOM05D005335 ORTHO05D006472 1.6e-09 67.0 121 43.8
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 8.1e-09 64.7 173 28.9
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.8e-08 63.5 125 36.0
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.4e-08 63.2 144 32.6
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 1.2e-07 60.8 69 89.9
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 5.8e-07 58.5 244 34.4
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 7.6e-07 58.2 125 32.8
unitig_8.g4035 Utricularia gibba HOM05D005335 ORTHO05D006472 7.6e-07 58.2 129 51.2
ATR0561G180 Amborella trichopoda HOM05D005335 ORTHO05D006472 1.7e-06 57.0 174 49.4
CDE05G3493 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 1.7e-06 57.0 127 43.3
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.7e-06 57.0 177 42.9


User provided reference genes

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