Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 2.2e-78 295.4 138 100.0
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.3e-43 179.1 99 81.8
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 9.8e-42 173.7 86 90.7
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 8.3e-41 170.6 133 64.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 5.4e-40 167.9 144 59.0
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 2.7e-39 165.6 130 60.8
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 7.7e-39 164.1 123 62.6
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.0e-38 163.7 149 59.1
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.0e-38 163.7 133 62.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.3e-38 163.3 130 60.0
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.7e-38 162.9 130 60.0
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.9e-38 162.2 104 71.2
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 8.5e-38 160.6 124 61.3
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.1e-37 160.2 99 74.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.2e-37 158.7 130 59.2
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.2e-37 158.3 130 60.0
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 5.5e-37 157.9 133 59.4
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 5.5e-37 157.9 133 61.7
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 7.2e-37 157.5 141 56.0
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 9.4e-37 157.1 135 58.5
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.2e-36 156.8 102 69.6
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.2e-36 156.8 127 59.8
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.2e-36 156.8 83 79.5
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 2.7e-36 155.6 126 57.1
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 8.0e-36 154.1 130 58.5
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 8.0e-36 154.1 95 74.7
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.0e-35 153.7 137 56.9
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.0e-35 153.7 83 81.9
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 1.0e-35 153.7 129 59.7
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.0e-35 153.7 124 57.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.4e-35 153.3 129 58.9
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.4e-35 153.3 99 67.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.3e-35 152.5 134 58.2
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 3.0e-35 152.1 128 57.8
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 3.0e-35 152.1 128 57.8
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 3.0e-35 152.1 128 57.8
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 3.0e-35 152.1 112 62.5
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 3.0e-35 152.1 139 56.8
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 3.0e-35 152.1 126 60.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.0e-35 151.8 136 55.1
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 4.0e-35 151.8 85 77.6
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 4.0e-35 151.8 139 54.0
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 6.8e-35 151.0 117 60.7
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 6.8e-35 151.0 123 61.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 8.8e-35 150.6 130 56.9
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.2e-34 150.2 81 80.2
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.2e-34 150.2 130 55.4
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.5e-34 149.8 128 57.0
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.5e-34 149.8 99 68.7
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 2.0e-34 149.4 120 60.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 2.6e-34 149.1 86 75.6
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 3.4e-34 148.7 73 86.3
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 4.4e-34 148.3 97 66.0
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 4.4e-34 148.3 100 66.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 4.4e-34 148.3 112 63.4
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 5.7e-34 147.9 127 57.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 5.7e-34 147.9 109 64.2
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 7.5e-34 147.5 95 70.5
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 7.5e-34 147.5 129 55.8
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 7.5e-34 147.5 88 73.9
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 9.8e-34 147.1 100 65.0
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 9.8e-34 147.1 73 87.7
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.3e-33 146.7 93 72.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.7e-33 146.4 129 55.0
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.7e-33 146.4 90 74.4
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.2e-33 146.0 71 85.9
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.2e-33 146.0 96 69.8
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 2.8e-33 145.6 84 75.0
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 6.3e-33 144.4 127 56.7
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 8.3e-33 144.1 126 55.6
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.1e-32 143.7 131 55.7
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.1e-32 143.7 101 64.4
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 5.4e-32 141.4 108 59.3
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 5.4e-32 141.4 97 63.9
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 7.0e-32 141.0 100 62.0
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 9.1e-32 140.6 111 57.7
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.2e-31 140.2 138 50.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 5.9e-31 137.9 124 52.4
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.5e-29 132.5 83 66.3
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 9.5e-29 130.6 78 70.5
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.2e-28 130.2 127 52.8
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 4.7e-28 128.3 116 55.2
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 6.1e-28 127.9 82 72.0
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.0e-27 127.1 68 79.4
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.0e-27 127.1 104 59.6
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.4e-27 126.7 71 77.5
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 4.0e-27 125.2 66 80.3
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 5.2e-27 124.8 69 79.7
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 8.9e-27 124.0 116 57.8
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 3.4e-26 122.1 94 64.9
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 5.7e-26 121.3 79 72.2
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 5.7e-26 121.3 70 77.1
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.9e-25 119.0 93 58.1
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.1e-24 117.1 137 48.2
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.8e-24 116.3 73 71.2
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 2.4e-24 115.9 70 65.7
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.1e-21 107.1 65 70.8
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.3e-17 93.6 64 53.1
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 8.3e-17 90.9 69 58.0
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 5.6e-13 78.2 95 46.3


User provided reference genes

Program Settings