Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.7e-44 182.2 88 100.0
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 5.1e-20 100.9 90 58.9
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 5.7e-19 97.4 60 71.7
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 7.4e-19 97.1 90 55.6
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 7.4e-19 97.1 91 58.2
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 4.8e-18 94.4 90 53.3
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 6.3e-18 94.0 60 68.3
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 8.2e-18 93.6 90 53.3
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 8.2e-18 93.6 60 70.0
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 8.2e-18 93.6 90 54.4
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 1.1e-17 93.2 60 65.0
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.1e-17 93.2 90 52.2
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.4e-17 92.8 90 53.3
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 1.8e-17 92.4 90 51.1
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 1.8e-17 92.4 60 66.7
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.8e-17 92.4 60 70.0
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.4e-17 92.0 60 66.7
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 2.4e-17 92.0 60 63.3
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 2.4e-17 92.0 60 65.0
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 2.4e-17 92.0 90 51.1
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.1e-17 91.7 60 68.3
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 3.1e-17 91.7 90 51.1
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 3.1e-17 91.7 90 51.1
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 4.1e-17 91.3 90 51.1
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 4.1e-17 91.3 60 66.7
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 4.1e-17 91.3 60 63.3
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 4.1e-17 91.3 59 66.1
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 6.9e-17 90.5 59 64.4
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 6.9e-17 90.5 60 68.3
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.2e-16 89.7 90 51.1
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 1.5e-16 89.4 90 50.0
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 2.0e-16 89.0 90 50.0
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 2.6e-16 88.6 90 50.0
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 2.6e-16 88.6 60 61.7
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.6e-16 88.6 90 46.7
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 3.4e-16 88.2 60 61.7
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 3.4e-16 88.2 60 63.3
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.4e-16 88.2 60 58.3
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 4.5e-16 87.8 90 51.1
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.5e-16 87.8 60 65.0
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.5e-16 87.8 60 63.3
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 4.5e-16 87.8 83 51.8
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 5.9e-16 87.4 60 65.0
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.9e-16 87.4 60 63.3
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.9e-16 87.4 90 50.0
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.9e-16 87.4 60 63.3
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 5.9e-16 87.4 60 63.3
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 7.7e-16 87.0 60 61.7
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 7.7e-16 87.0 60 61.7
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 7.7e-16 87.0 60 61.7
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.0e-15 86.7 60 63.3
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.0e-15 86.7 60 63.3
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 1.0e-15 86.7 90 48.9
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.0e-15 86.7 90 48.9
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 1.3e-15 86.3 59 62.7
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.7e-15 85.9 90 48.9
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 1.7e-15 85.9 60 60.0
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 1.7e-15 85.9 60 60.0
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 2.2e-15 85.5 60 60.0
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 2.2e-15 85.5 60 58.3
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 3.8e-15 84.7 60 60.0
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 5.0e-15 84.3 60 60.0
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 6.5e-15 84.0 60 60.0
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 6.5e-15 84.0 59 61.0
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 6.5e-15 84.0 60 58.3
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 8.5e-15 83.6 60 58.3
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 8.5e-15 83.6 90 45.6
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 8.5e-15 83.6 90 47.8
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 60.0
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 60.0
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 60.0
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 60.0
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 58.3
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 58.3
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 1.1e-14 83.2 60 60.0
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.9e-14 82.4 60 60.0
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 1.9e-14 82.4 59 55.9
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 2.5e-14 82.0 90 46.7
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 4.2e-14 81.3 60 56.7
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.2e-14 81.3 90 46.7
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.2e-14 81.3 90 46.7
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 4.2e-14 81.3 60 58.3
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 7.2e-14 80.5 60 58.3
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 7.2e-14 80.5 87 47.1
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 56.7
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 56.7
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 56.7
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.2e-13 79.7 64 53.1
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 55.0
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 55.0
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.2e-13 79.7 60 56.7
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 1.6e-13 79.3 60 58.3
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 2.7e-13 78.6 60 60.0
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 3.6e-13 78.2 63 55.6
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 4.6e-13 77.8 60 58.3
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 6.1e-13 77.4 60 56.7
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 6.1e-13 77.4 60 56.7
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 7.9e-13 77.0 90 46.7
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 1.4e-12 76.3 60 50.0
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.0e-12 75.1 61 55.7
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 6.7e-12 73.9 60 53.3
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.7e-12 73.9 90 43.3
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 8.8e-12 73.6 90 40.0
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.1e-11 73.2 90 40.0
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.1e-11 73.2 90 40.0
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.1e-11 73.2 90 40.0
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.1e-11 73.2 90 40.0
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 2.0e-11 72.4 90 41.1
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 5.7e-11 70.9 90 38.9
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 5.7e-11 70.9 90 38.9
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 5.7e-11 70.9 90 38.9
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 5.7e-11 70.9 90 38.9
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 5.7e-11 70.9 90 38.9
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 7.4e-11 70.5 90 38.9
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 9.7e-11 70.1 90 40.0
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.8e-10 68.6 90 41.1
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 8.2e-10 67.0 90 37.8
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 8.2e-10 67.0 59 45.8
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 1.1e-09 66.6 60 45.0
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.8e-09 65.9 60 46.7
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 2.4e-09 65.5 90 37.8
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.1e-09 65.1 90 36.7
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 4.1e-09 64.7 44 63.6
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 5.3e-09 64.3 49 59.2
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 6.9e-09 63.9 45 60.0
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 1.2e-08 63.2 60 46.7
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.7e-07 59.3 57 47.4
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 3.8e-07 58.2 43 58.1
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 3.8e-07 58.2 43 58.1
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 4.2e-06 54.7 35 68.6


User provided reference genes

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