Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0495721 Helianthus annuus HOM05D000767 ORTHO05D223655 1.6e-41 172.6 103 100.0
HanXRQChr16g0529111 Helianthus annuus HOM05D000767 ORTHO05D000635 5.2e-24 114.4 83 80.7
Lsat_1_v5_gn_4_20080 Lactuca sativa HOM05D000767 ORTHO05D000635 2.3e-11 72.4 81 59.3
HanXRQChr17g0567951 Helianthus annuus HOM05D000767 ORTHO05D000635 8.1e-09 63.9 94 40.4
GSVIVG01011942001 Vitis vinifera HOM05D000767 ORTHO05D000635 1.1e-08 63.5 85 48.2
Sabra10G0098000 Salix brachista HOM05D000767 ORTHO05D000635 2.4e-08 62.4 43 69.8
Potri.008G117500 Populus trichocarpa HOM05D000767 ORTHO05D000635 3.1e-08 62.0 79 54.4
Oeu042040.1 Olea europaea HOM05D000767 ORTHO05D000635 4.0e-08 61.6 47 61.7
SalBow8G1915 Salvia bowleyana HOM05D000767 ORTHO05D000635 4.0e-08 61.6 46 63.0
MD16G1047300 Malus domestica HOM05D000767 ORTHO05D000635 5.3e-08 61.2 44 63.6
Prupe.1G306300 Prunus persica HOM05D000767 ORTHO05D000635 6.9e-08 60.8 42 64.3
Ciclev10031793m.g Citrus clementina HOM05D000767 ORTHO05D000635 9.0e-08 60.5 42 64.3
Duzib248G1037 Durio zibethinus HOM05D000767 ORTHO05D000635 9.0e-08 60.5 44 65.9
Potri.010G128900 Populus trichocarpa HOM05D000767 ORTHO05D000635 9.0e-08 60.5 43 67.4
Dinv21124 Davidia involucrata HOM05D000767 ORTHO05D000635 1.2e-07 60.1 42 64.3
TAR462G0002 Trochodendron aralioides HOM05D000767 ORTHO05D000635 1.2e-07 60.1 46 54.3
Medtr1g093080 Medicago truncatula HOM05D000767 ORTHO05D000635 1.5e-07 59.7 44 68.2
Thecc.02G360000 Theobroma cacao HOM05D000767 ORTHO05D000635 1.5e-07 59.7 47 61.7
arahy.Tifrunner.gnm1.ann1.MQY6TT Arachis hypogaea HOM05D000767 ORTHO05D000635 2.6e-07 58.9 43 65.1
arahy.Tifrunner.gnm1.ann1.Y2U02I Arachis hypogaea HOM05D000767 ORTHO05D000635 2.6e-07 58.9 43 65.1
Manes.14G098400 Manihot esculenta HOM05D000767 ORTHO05D000635 2.6e-07 58.9 46 65.2
Psat6g178160 Pisum sativum HOM05D000767 ORTHO05D000635 2.6e-07 58.9 44 68.2
Phvul.003G028000 Phaseolus vulgaris HOM05D000767 ORTHO05D000635 4.5e-07 58.2 45 64.4
Lalb_Chr02g0151731 Lupinus albus HOM05D000767 ORTHO05D000635 7.6e-07 57.4 44 65.9
SalBow8G5444 Salvia bowleyana HOM05D000767 ORTHO05D000635 9.9e-07 57.0 47 59.6
VMungo0720G1026 Vigna mungo HOM05D000767 ORTHO05D000635 9.9e-07 57.0 44 65.9
CSS0006078 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 1.3e-06 56.6 42 59.5
CSS0031258 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 1.3e-06 56.6 42 59.5
Manes.06G071500 Manihot esculenta HOM05D000767 ORTHO05D000635 1.3e-06 56.6 91 51.6
VMungo1215G2583 Vigna mungo HOM05D000767 ORTHO05D000635 1.3e-06 56.6 45 62.2
Actinidia14858 Actinidia chinensis HOM05D000767 ORTHO05D000635 2.2e-06 55.8 44 63.6
arahy.Tifrunner.gnm1.ann1.GRY8GW Arachis hypogaea HOM05D000767 ORTHO05D000635 2.2e-06 55.8 46 65.2
arahy.Tifrunner.gnm1.ann1.ZMGM97 Arachis hypogaea HOM05D000767 ORTHO05D000635 2.2e-06 55.8 46 65.2
Eucgr.G02343 Eucalyptus grandis HOM05D000767 ORTHO05D000635 2.2e-06 55.8 44 61.4
Glyma.01G086700 Glycine max HOM05D000767 ORTHO05D000635 2.2e-06 55.8 43 58.1
MSTRG.2256 Avicennia marina HOM05D000767 ORTHO05D000635 2.9e-06 55.5 43 62.8
Phvul.007G102900 Phaseolus vulgaris HOM05D000767 ORTHO05D000635 2.9e-06 55.5 44 61.4
MSTRG.13507 Avicennia marina HOM05D000767 ORTHO05D000635 3.8e-06 55.1 43 65.1
MD13G1045700 Malus domestica HOM05D000767 ORTHO05D000635 3.8e-06 55.1 42 57.1
Actinidia16623 Actinidia chinensis HOM05D000767 ORTHO05D000635 6.4e-06 54.3 44 63.6
Cc11_g10520 Coffea canephora HOM05D000767 ORTHO05D000635 6.4e-06 54.3 45 62.2
ECA234G4102 Erigeron canadensis HOM05D000767 ORTHO05D000635 6.4e-06 54.3 81 53.1
Glyma.20G186500 Glycine max HOM05D000767 ORTHO05D000635 6.4e-06 54.3 44 61.4
Hma1.2p1_0862F.1_g229940 Hydrangea macrophylla HOM05D000767 ORTHO05D000635 6.4e-06 54.3 43 65.1
Nn3g17763 Nelumbo nucifera HOM05D000767 ORTHO05D000635 8.4e-06 53.9 42 61.9
TPR.G18700 Trifolium pratense HOM05D000767 ORTHO05D000635 8.4e-06 53.9 45 64.4


User provided reference genes

Program Settings