Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 6.6e-271 936.8 481 100.0
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 6.3e-189 664.5 483 73.5
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 4.6e-147 525.4 472 64.2
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 1.9e-124 450.3 479 56.6
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.6e-115 420.6 469 53.9
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 4.3e-113 412.5 405 57.5
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 5.3e-111 405.6 444 53.2
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 2.9e-109 399.8 497 50.3
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 2.3e-106 390.2 470 52.1
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 1.4e-103 380.9 438 52.1
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 5.3e-103 379.0 384 55.5
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 7.0e-103 378.6 389 56.6
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 9.1e-103 378.3 462 52.4
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 3.5e-102 376.3 385 56.1
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 8.5e-101 371.7 382 56.0
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 1.1e-100 371.3 470 50.6
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 1.0e-98 364.8 372 54.8
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 1.8e-98 364.0 398 53.3
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 5.2e-98 362.5 446 48.4
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 3.3e-97 359.8 445 48.1
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 3.3e-97 359.8 446 48.2
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 4.4e-97 359.4 427 52.5
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 7.4e-97 358.6 445 48.1
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 1.3e-96 357.8 441 48.3
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 1.3e-96 357.8 442 48.9
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 3.7e-96 356.3 447 47.4
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 6.3e-96 355.5 453 47.0
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 4.1e-95 352.8 436 48.2
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 4.1e-95 352.8 466 48.9
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 7.0e-95 352.1 478 47.9
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 7.0e-95 352.1 478 47.9
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 9.1e-95 351.7 404 51.5
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 4.5e-94 349.4 472 45.8
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 5.9e-94 349.0 417 49.6
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 5.9e-94 349.0 421 50.8
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 1.0e-93 348.2 443 47.6
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.2e-93 347.1 390 50.0
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 6.5e-93 345.5 435 45.7
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 6.5e-93 345.5 442 48.0
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 2.1e-91 340.5 416 49.5
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 2.7e-91 340.1 468 47.4
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 6.1e-91 339.0 447 46.1
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 6.1e-91 339.0 447 46.5
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 6.1e-91 339.0 446 46.0
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 1.8e-90 337.4 408 49.3
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 2.3e-90 337.0 369 50.1
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 5.2e-90 335.9 481 45.3
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 6.8e-90 335.5 481 45.3
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 1.2e-89 334.7 442 48.2
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 1.3e-88 331.3 445 47.9
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 6.3e-88 328.9 441 46.0
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 2.4e-87 327.0 448 46.0
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 7.0e-87 325.5 463 45.6
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 9.1e-87 325.1 380 49.5
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 2.0e-86 323.9 346 56.9
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 2.2e-85 320.5 432 44.9
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 2.2e-85 320.5 457 45.5
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 2.2e-85 320.5 451 44.6
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 2.9e-85 320.1 458 44.8
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 5.0e-85 319.3 426 45.5
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 5.0e-85 319.3 466 44.0
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 5.0e-85 319.3 415 49.2
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 3.2e-84 316.6 408 46.6
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 1.6e-83 314.3 418 47.4
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 8.0e-83 312.0 453 43.9
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 2.3e-82 310.5 451 43.7
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 8.8e-82 308.5 392 48.2
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 1.2e-81 308.1 469 43.1
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 2.0e-81 307.4 352 51.1
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 9.8e-81 305.1 437 44.6
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 4.9e-80 302.8 428 46.7
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 3.1e-79 300.1 432 45.8
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 3.1e-79 300.1 432 45.6
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 4.1e-79 299.7 568 40.1
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 7.0e-79 298.9 432 45.6
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 6.6e-77 292.4 233 64.4
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 1.5e-76 291.2 442 42.1
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 1.9e-76 290.8 413 43.8
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 2.5e-76 290.4 295 54.6
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 5.2e-74 282.7 401 42.4
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 1.1e-71 275.0 518 39.4
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 1.1e-71 275.0 424 40.6
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 8.6e-69 265.4 357 43.1
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 1.1e-68 265.0 431 40.8
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 3.6e-67 260.0 367 43.6
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 4.4e-65 253.1 380 43.7
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.9e-64 250.4 459 40.3
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 7.8e-62 242.3 451 39.2
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 3.4e-57 226.9 458 36.5
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 5.8e-57 226.1 438 39.7
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 5.8e-57 226.1 438 39.7
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 3.2e-55 220.3 432 36.8
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 1.6e-54 218.0 291 47.4
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.8e-51 207.2 173 60.7
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 1.1e-50 205.3 165 63.6
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 5.8e-49 199.5 438 33.8
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.3e-48 198.4 160 61.9
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 3.7e-48 196.8 424 36.1
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 8.4e-48 195.7 281 42.7
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.0e-45 188.7 138 73.9
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 8.1e-43 179.1 436 33.5
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.0e-37 162.2 272 41.5
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 3.6e-35 153.7 408 30.1
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 2.8e-27 127.5 219 38.4
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.8e-27 127.5 217 37.8
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.8e-26 124.8 222 38.7
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 2.4e-26 124.4 85 76.5
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.4e-23 115.2 83 71.1
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 2.1e-22 111.3 282 31.6
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 8.7e-21 105.9 301 31.2
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 4.8e-19 100.1 315 34.0
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 1.2e-17 95.5 83 62.7
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 2.0e-17 94.7 76 61.8
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 5.1e-13 80.1 46 84.8
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 6.7e-13 79.7 105 45.7
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.9e-12 78.2 51 76.5
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 6.3e-11 73.2 72 55.6
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 1.4e-10 72.0 308 25.3
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 6.9e-10 69.7 77 49.4
Glyma.10G295900 Glycine max HOM05D006262 ORTHO05D007266 2.6e-09 67.8 182 36.3
FAN07G1916 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.7e-08 65.1 53 64.2


User provided reference genes

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