Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0494771 Helianthus annuus HOM05D000421 ORTHO05D219069 1.0e-57 226.5 114 100.0
HanXRQChr11g0345971 Helianthus annuus HOM05D000421 ORTHO05D000855 3.4e-08 62.0 28 96.4
Lsat_1_v5_gn_1_64040 Lactuca sativa HOM05D000421 ORTHO05D000855 1.3e-07 60.1 28 89.3
Lsat_1_v5_gn_6_45560 Lactuca sativa HOM05D000421 ORTHO05D000855 1.7e-07 59.7 28 89.3
TPR.G6123 Trifolium pratense HOM05D000421 ORTHO05D000855 3.8e-07 58.5 28 92.9
Ca_20854_v3 Cicer arietinum L. HOM05D000421 ORTHO05D000855 1.4e-06 56.6 28 89.3
ECA233G1323 Erigeron canadensis HOM05D000421 ORTHO05D000855 1.4e-06 56.6 28 85.7
CSS0040605 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D000855 2.4e-06 55.8 27 85.2
ECA238G1762 Erigeron canadensis HOM05D000421 ORTHO05D000855 2.4e-06 55.8 28 82.1
HanXRQChr09g0259271 Helianthus annuus HOM05D000421 ORTHO05D000855 2.4e-06 55.8 28 82.1
Lsat_1_v5_gn_2_100461 Lactuca sativa HOM05D000421 ORTHO05D000855 2.4e-06 55.8 28 82.1
Lalb_Chr19g0137151 Lupinus albus HOM05D000421 ORTHO05D000855 2.4e-06 55.8 28 89.3
SGA_v2.0_scaffold180G39649 Striga asiatica HOM05D000421 ORTHO05D000855 2.4e-06 55.8 28 82.1
DCAR_018799 Daucus carota HOM05D000421 ORTHO05D000855 3.2e-06 55.5 28 85.7
HanXRQChr13g0396731 Helianthus annuus HOM05D000421 ORTHO05D000855 3.2e-06 55.5 28 85.7
Lj2C1024G11 Lonicera japonica HOM05D000421 ORTHO05D000855 3.2e-06 55.5 28 89.3
Actinidia03721 Actinidia chinensis HOM05D000421 ORTHO05D000855 4.2e-06 55.1 28 89.3
CiPaw.13G115600 Carya illinoinensis HOM05D000421 ORTHO05D000855 4.2e-06 55.1 28 89.3
vmacro03206 Vaccinium macrocarpon HOM05D000421 ORTHO05D000855 4.2e-06 55.1 28 89.3
VMungo1080G0387 Vigna mungo HOM05D000421 ORTHO05D000855 4.2e-06 55.1 28 85.7
arahy.Tifrunner.gnm1.ann1.EVW0RM Arachis hypogaea HOM05D000421 ORTHO05D000855 5.5e-06 54.7 45 62.2
arahy.Tifrunner.gnm1.ann1.U4UQX5 Arachis hypogaea HOM05D000421 ORTHO05D000855 5.5e-06 54.7 45 62.2
Cpa.g.sc279.4 Carica papaya HOM05D000421 ORTHO05D000855 5.5e-06 54.7 28 85.7
Ca_01402_v3 Cicer arietinum L. HOM05D000421 ORTHO05D000855 5.5e-06 54.7 28 85.7
MELO3C025779.2 Cucumis melo HOM05D000587 ORTHO05D001561 5.5e-06 54.7 28 85.7
Rhsim13G0095400 Rhododendron simsii HOM05D000421 ORTHO05D000855 5.5e-06 54.7 28 89.3
THA.LOC104815743 Tarenaya hassleriana HOM05D000421 ORTHO05D000855 5.5e-06 54.7 28 85.7
TWI31G0897 Tripterygium wilfordii HOM05D000421 ORTHO05D000855 5.5e-06 54.7 28 85.7
Actinidia07145 Actinidia chinensis HOM05D000421 ORTHO05D000855 7.1e-06 54.3 28 85.7
Actinidia24110 Actinidia chinensis HOM05D000421 ORTHO05D000855 7.1e-06 54.3 28 85.7
CiPaw.14G082400 Carya illinoinensis HOM05D000421 ORTHO05D000855 7.1e-06 54.3 28 89.3
PGR102G2425 Punica granatum HOM05D000421 ORTHO05D000855 7.1e-06 54.3 28 85.7
vmacro14432 Vaccinium macrocarpon HOM05D000421 ORTHO05D000855 7.1e-06 54.3 28 89.3
Cc01_g10970 Coffea canephora HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
Dinv05956 Davidia involucrata HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
Dinv32731 Davidia involucrata HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
HanXRQChr14g0452671 Helianthus annuus HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 78.6
Hma1.2p1_0058F.1_g032390 Hydrangea macrophylla HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
Lalb_Chr14g0374591 Lupinus albus HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
Medtr2g094650 Medicago truncatula HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 82.1
Medtr4g058800 Medicago truncatula HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7
Nn2g10823 Nelumbo nucifera HOM05D000421 ORTHO05D000855 9.3e-06 53.9 28 85.7


User provided reference genes

Program Settings