Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 2.3e-111 405.6 205 100.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 3.7e-69 265.4 193 71.0
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 5.3e-68 261.5 182 75.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.7e-50 203.4 186 57.5
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 3.8e-50 202.2 180 60.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 3.9e-47 192.2 207 51.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 6.7e-47 191.4 152 63.2
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 9.7e-46 187.6 188 53.2
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 3.7e-45 185.7 180 54.4
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.4e-44 183.7 153 61.4
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.3e-44 181.8 160 60.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.2e-43 180.6 155 61.9
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.2e-43 180.6 155 61.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 5.9e-43 178.3 162 56.8
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.0e-42 177.6 179 56.4
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.7e-42 176.8 188 53.2
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.2e-42 176.4 168 56.0
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 3.8e-42 175.6 155 61.9
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 5.0e-42 175.3 157 60.5
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 5.0e-42 175.3 181 51.4
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.0e-42 175.3 161 59.0
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.1e-41 174.1 188 54.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.4e-41 173.7 183 49.2
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.4e-41 173.7 185 54.6
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.4e-41 173.7 155 60.0
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.4e-41 173.7 155 60.0
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.5e-41 172.9 155 61.9
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.2e-41 172.2 155 59.4
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 5.5e-41 171.8 183 52.5
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 7.2e-41 171.4 179 55.3
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 7.2e-41 171.4 180 51.1
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.2e-40 170.6 163 57.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.6e-40 170.2 179 51.4
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.6e-40 170.2 177 54.8
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.6e-40 169.1 186 54.3
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 7.9e-40 167.9 153 57.5
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-39 167.2 193 51.3
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.3e-39 166.4 180 50.0
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.3e-39 166.4 157 54.8
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.0e-39 166.0 197 47.7
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.9e-39 165.6 177 54.2
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.9e-39 165.6 178 52.2
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 6.7e-39 164.9 186 51.6
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 2.0e-38 163.3 172 52.9
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.6e-38 162.9 194 48.5
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.6e-38 162.9 187 50.3
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.7e-38 161.8 188 48.4
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 5.7e-38 161.8 157 56.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 5.7e-38 161.8 164 56.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 5.7e-38 161.8 138 60.9
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.3e-37 160.6 195 44.6
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.3e-37 160.6 179 53.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.7e-37 160.2 186 48.9
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.2e-37 159.8 154 58.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.2e-37 159.8 164 56.1
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 6.3e-37 158.3 155 56.1
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 8.2e-37 157.9 154 57.1
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.1e-36 157.5 179 45.3
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.8e-36 156.8 182 50.0
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.4e-36 156.4 180 51.7
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.1e-36 156.0 138 55.1
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.1e-36 156.0 181 51.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.1e-36 155.6 150 52.7
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 5.3e-36 155.2 157 54.1
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 5.3e-36 155.2 164 54.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.2e-35 154.1 187 46.5
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.2e-35 154.1 151 53.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.6e-35 153.7 149 53.0
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.6e-35 153.7 185 45.4
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-35 153.3 145 57.2
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.0e-35 153.3 183 47.5
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 4.5e-35 152.1 151 57.0
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 4.5e-35 152.1 181 47.5
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 5.9e-35 151.8 151 50.3
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 7.7e-35 151.4 153 55.6
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.3e-34 150.6 152 56.6
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 2.2e-34 149.8 129 58.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.8e-34 149.1 154 48.7
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 6.5e-34 148.3 151 55.6
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.5e-34 148.3 188 45.2
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.9e-33 146.7 155 48.4
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.2e-33 146.0 155 47.7
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.2e-33 146.0 155 47.7
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 3.2e-33 146.0 151 48.3
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.2e-33 146.0 155 55.5
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 4.2e-33 145.6 151 49.7
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.2e-33 145.6 155 47.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 4.2e-33 145.6 151 51.7
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.2e-33 145.6 151 48.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.2e-33 145.6 151 48.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 5.5e-33 145.2 167 47.3
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 7.2e-33 144.8 156 48.7
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 9.4e-33 144.4 151 47.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.6e-32 142.5 157 49.0
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.3e-31 139.8 155 46.5
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.3e-31 139.8 155 46.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 4.4e-30 135.6 145 54.5
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.3e-29 134.0 164 48.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.4e-28 129.8 126 54.8
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 9.1e-28 127.9 129 53.5
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 9.1e-28 127.9 162 45.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.7e-27 126.3 117 56.4
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 8.5e-26 121.3 193 40.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.4e-25 117.9 112 54.5
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.8e-23 111.7 117 47.9
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 6.3e-21 105.1 108 50.9
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.7e-18 97.1 76 60.5
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.2e-17 92.8 72 58.3
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 8.3e-13 78.2 127 39.4
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 4.5e-11 72.4 135 34.8
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.3e-10 70.9 51 60.8
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.5e-09 66.6 83 49.4


User provided reference genes

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