Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 4.7e-283 977.2 508 100.0
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 5.2e-226 787.7 474 87.8
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.7e-216 756.1 477 83.4
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 8.5e-184 647.5 478 71.3
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 7.0e-178 627.9 476 69.5
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 6.5e-176 621.3 494 67.6
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.4e-175 620.2 475 70.1
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.5e-175 619.4 475 70.1
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 5.5e-175 618.2 476 69.7
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 3.6e-174 615.5 490 69.4
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.0e-173 614.0 475 69.9
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 3.9e-173 612.1 475 68.6
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 3.3e-172 609.0 475 68.8
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 3.3e-172 609.0 475 69.7
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.8e-171 605.9 476 69.3
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 4.8e-171 605.1 484 69.2
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.4e-170 603.6 476 68.9
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 7.7e-169 597.8 478 68.8
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 2.2e-168 596.3 484 68.4
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.1e-167 594.0 481 68.0
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 3.2e-167 592.4 476 69.3
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 7.2e-167 591.3 493 67.3
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.2e-166 590.5 478 67.6
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 8.0e-166 587.8 484 66.7
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 1.4e-165 587.0 476 67.4
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 6.7e-165 584.7 476 67.4
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 8.8e-165 584.3 476 67.9
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 1.2e-164 583.9 477 66.5
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 4.4e-164 582.0 501 66.9
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 2.2e-163 579.7 476 67.0
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 2.8e-163 579.3 483 67.1
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 3.7e-163 578.9 476 66.6
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 3.1e-162 575.9 479 66.2
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 5.3e-162 575.1 483 66.7
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 9.1e-162 574.3 478 66.1
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 2.0e-161 573.2 477 66.2
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 2.7e-161 572.8 474 65.0
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 5.9e-161 571.6 474 65.2
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 2.9e-160 569.3 475 65.3
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.9e-160 569.3 474 64.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 3.8e-160 568.9 476 66.0
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 5.0e-160 568.5 474 64.6
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.5e-159 567.0 481 64.9
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 6.1e-158 561.6 474 64.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 6.1e-158 561.6 474 65.2
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.0e-157 560.8 479 64.7
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 1.8e-157 560.1 406 74.9
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 4.0e-157 558.9 475 63.6
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 7.5e-156 554.7 441 71.2
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 1.3e-155 553.9 475 64.8
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 2.2e-155 553.1 475 62.7
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-155 552.7 459 68.4
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.8e-155 552.0 483 64.8
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 6.3e-155 551.6 475 65.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 4.1e-154 548.9 475 62.1
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 5.9e-153 545.0 475 61.9
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.3e-152 543.9 481 62.6
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.5e-151 540.4 464 65.7
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.9e-151 540.0 481 62.6
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.9e-151 540.0 539 58.6
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 4.2e-151 538.9 481 62.4
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 7.2e-151 538.1 474 63.1
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.2e-150 537.3 482 62.7
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 2.8e-150 536.2 476 62.4
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 3.6e-150 535.8 475 61.9
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 8.0e-150 534.6 477 65.2
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 8.0e-150 534.6 477 63.1
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 3.4e-148 529.3 474 61.8
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 4.9e-147 525.4 467 61.9
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 8.3e-147 524.6 466 61.8
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 4.5e-145 518.8 475 62.3
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.3e-144 517.3 477 61.0
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 3.9e-144 515.8 477 59.1
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 2.1e-142 510.0 475 60.6
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.0e-138 495.0 457 60.8
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.0e-138 495.0 453 61.4
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.7e-136 490.3 409 67.7
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.3e-136 490.0 523 55.3
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 5.0e-136 488.8 491 58.5
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 7.3e-135 485.0 475 58.5
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 4.4e-132 475.7 481 57.6
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.7e-131 473.8 499 55.5
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 4.3e-127 459.1 443 60.3
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 1.5e-124 450.7 448 59.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 7.8e-121 438.3 412 60.7
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 1.5e-116 424.1 346 65.6
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 8.4e-115 418.3 355 63.9
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 2.5e-111 406.8 366 63.1
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 5.5e-90 335.9 472 44.3
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 7.1e-90 335.5 300 61.7
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 1.1e-87 328.2 366 52.2
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.1e-85 321.6 492 44.7
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 7.9e-81 305.4 266 63.9
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.9e-79 300.8 285 58.6
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 1.4e-69 268.1 252 58.7
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.0e-64 251.9 218 65.1
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 5.0e-59 233.0 247 57.1
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 4.4e-55 219.9 186 62.4
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 2.4e-53 214.2 187 64.2
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 7.7e-52 209.1 142 74.6
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 8.0e-49 199.1 184 60.3
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 4.0e-48 196.8 130 78.5
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 1.2e-41 175.3 175 59.4
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 2.0e-39 167.9 127 67.7
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 2.0e-36 157.9 491 29.5
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 2.7e-36 157.5 147 58.5
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 7.5e-31 139.4 166 50.0
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 8.3e-30 136.0 97 78.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-28 131.7 113 68.1
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-26 124.4 113 65.5
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 2.0e-23 114.8 91 62.6
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 3.7e-22 110.5 72 79.2
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 7.8e-20 102.8 88 59.1
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 5.0e-19 100.1 94 62.8
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.3e-18 97.1 76 60.5
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.5e-15 88.6 59 74.6
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.0e-11 75.9 57 66.7
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-08 65.9 40 75.0


User provided reference genes

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