Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 2.4e-241 839.0 607 100.0
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 7.3e-49 199.5 621 33.2
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 2.8e-48 197.6 596 29.4
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 1.4e-44 185.3 624 30.3
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.2e-44 184.1 600 31.5
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 7.1e-44 183.0 591 29.9
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 3.9e-42 177.2 638 28.4
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 1.1e-41 175.6 655 27.0
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 2.5e-41 174.5 645 31.9
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 1.2e-40 172.2 628 28.3
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.1e-39 169.1 621 31.7
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 6.8e-39 166.4 601 29.5
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 1.3e-37 162.2 600 41.2
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 3.8e-37 160.6 625 29.1
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 7.8e-35 152.9 602 26.1
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.6e-32 144.1 278 36.7
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 8.1e-32 142.9 600 38.3
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 4.0e-31 140.6 608 32.6
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 6.9e-31 139.8 639 30.4
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 9.0e-31 139.4 596 26.8
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 2.0e-30 138.3 634 32.8
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 3.4e-30 137.5 612 27.1
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 7.6e-30 136.3 269 37.2
Lsat_1_v5_gn_4_137721 Lactuca sativa HOM05D004923 ORTHO05D005940 2.2e-29 134.8 255 39.6
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.4e-28 132.1 610 32.8
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 5.1e-26 123.6 606 29.7
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 1.1e-25 122.5 609 35.1
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 9.6e-25 119.4 261 36.4
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 2.8e-24 117.9 591 31.5
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 2.8e-24 117.9 624 35.7
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 1.8e-23 115.2 630 27.0
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 1.2e-22 112.5 305 32.8
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 1.5e-22 112.1 627 24.1
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.7e-21 108.6 630 23.8
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 2.9e-21 107.8 594 27.4
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 6.4e-21 106.7 742 26.4
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.1e-20 105.9 642 26.5
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.4e-20 105.5 243 31.7
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 2.4e-20 104.8 211 34.6
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 2.4e-20 104.8 603 24.9
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 3.2e-20 104.4 654 22.5
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 5.5e-20 103.6 619 22.3
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 5.5e-20 103.6 302 29.8
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.2e-19 102.4 592 35.6
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 2.1e-19 101.7 653 23.4
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 2.1e-19 101.7 209 34.9
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.8e-18 98.6 607 31.3
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 1.8e-18 98.6 626 31.5
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 2.3e-18 98.2 607 29.5
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 2.3e-18 98.2 277 31.0
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.9e-18 97.4 209 33.5
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 5.1e-18 97.1 615 23.6
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 6.7e-18 96.7 635 33.4
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.1e-17 95.9 209 33.0
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 1.5e-17 95.5 601 26.3
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.9e-17 95.1 260 28.1
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 2.5e-17 94.7 249 30.5
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.3e-17 94.0 220 30.9
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 4.3e-17 94.0 220 30.5
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 7.4e-17 93.2 610 23.3
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 7.4e-17 93.2 610 23.3
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 2.1e-16 91.7 134 43.3
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 3.7e-16 90.9 134 44.0
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 8.1e-16 89.7 582 27.1
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 1.4e-15 89.0 600 22.3
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 1.8e-15 88.6 302 27.5
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 2.4e-15 88.2 209 32.5
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 5.3e-15 87.0 613 34.3
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 6.9e-15 86.7 309 28.2
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 1.5e-14 85.5 607 30.1
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.5e-14 85.5 279 29.4
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 4.5e-14 84.0 189 34.9
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 7.6e-14 83.2 175 33.7
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.7e-13 82.0 717 23.3
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.9e-13 81.3 165 37.6
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 8.4e-13 79.7 246 28.0
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.1e-12 79.3 223 29.1
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 1.4e-12 79.0 616 22.9
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 1.9e-12 78.6 625 35.0
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 4.2e-12 77.4 249 25.3
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 9.3e-12 76.3 257 27.6
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 9.3e-12 76.3 163 35.6
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.2e-11 75.9 207 29.5
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 2.1e-11 75.1 212 31.1
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 3.5e-11 74.3 279 27.2
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 3.5e-11 74.3 279 27.2
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 6.0e-11 73.6 268 27.6
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 7.9e-11 73.2 277 25.6
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 7.9e-11 73.2 149 33.6
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.0e-10 72.8 298 26.8
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 1.0e-10 72.8 609 25.3
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.3e-10 72.4 532 25.6
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 3.9e-10 70.9 590 31.4
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 5.1e-10 70.5 265 27.2
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 6.7e-10 70.1 130 38.5
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 8.7e-10 69.7 314 26.4
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 8.7e-10 69.7 615 31.4
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 1.1e-09 69.3 625 25.9
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.9e-09 68.6 619 21.2
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 3.3e-09 67.8 130 37.7
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 4.3e-09 67.4 113 39.8
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 4.3e-09 67.4 302 27.2
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.3e-08 65.9 588 30.6
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 2.8e-08 64.7 593 31.9
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 1.1e-07 62.8 605 30.2
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.1e-07 62.8 304 24.7
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.8e-07 62.0 250 25.2
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 2.4e-07 61.6 96 38.5
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 4.1e-07 60.8 268 25.0
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 6.9e-07 60.1 154 27.9
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 6.9e-07 60.1 588 26.5
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 6.9e-07 60.1 226 27.0
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 9.0e-07 59.7 300 25.0
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 3.4e-06 57.8 617 25.3
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 7.6e-06 56.6 281 24.6


User provided reference genes

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