Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.1e-74 283.1 139 100.0
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.0e-67 260.0 139 90.6
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 3.4e-66 255.0 139 90.6
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 3.1e-64 248.4 136 89.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 2.3e-59 232.3 135 82.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 9.8e-58 226.9 137 80.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 9.8e-58 226.9 135 81.5
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 1.7e-57 226.1 139 80.6
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 2.8e-57 225.3 135 79.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 6.3e-57 224.2 135 80.7
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 6.3e-57 224.2 138 80.4
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 6.3e-57 224.2 137 79.6
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 8.3e-57 223.8 137 78.1
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 8.3e-57 223.8 137 79.6
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 8.3e-57 223.8 135 78.5
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 79.6
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 79.6
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 79.6
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.1e-56 223.4 137 79.6
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.1e-56 223.4 135 80.0
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 79.6
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 78.8
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 1.8e-56 222.6 136 78.7
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 78.1
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.4e-56 222.2 139 78.4
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 3.1e-56 221.9 135 76.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 3.1e-56 221.9 135 80.0
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 4.1e-56 221.5 137 79.6
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 4.1e-56 221.5 137 77.4
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.1e-56 221.5 135 79.3
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 5.4e-56 221.1 138 79.7
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 5.4e-56 221.1 138 79.7
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 7.0e-56 220.7 134 79.1
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.0e-56 220.7 135 78.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.0e-56 220.7 135 78.5
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 135 78.5
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 76.5
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.2e-55 219.9 137 78.8
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.6e-55 219.5 137 78.8
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 1.6e-55 219.5 134 79.9
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.0e-55 219.2 136 77.9
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 2.0e-55 219.2 136 78.7
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.5e-55 218.4 139 74.1
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 4.5e-55 218.0 136 78.7
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 5.9e-55 217.6 134 74.6
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 5.9e-55 217.6 135 76.3
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 5.9e-55 217.6 133 78.9
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 7.7e-55 217.2 137 76.6
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.0e-54 216.9 139 73.4
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 74.5
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.3e-54 216.5 135 76.3
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.3e-54 216.5 135 76.3
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 2.9e-54 215.3 138 76.1
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 2.9e-54 215.3 134 77.6
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 2.9e-54 215.3 135 75.6
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 2.9e-54 215.3 137 73.7
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 3.8e-54 214.9 138 78.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 3.8e-54 214.9 135 75.6
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 3.8e-54 214.9 137 76.6
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 75.2
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 5.0e-54 214.5 136 73.5
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 6.6e-54 214.2 135 75.6
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 8.6e-54 213.8 135 76.3
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.1e-53 213.4 135 76.3
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.9e-53 212.6 135 74.8
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.5e-53 212.2 131 76.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 5.6e-53 211.1 139 72.7
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 7.2e-53 210.7 136 73.5
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 7.2e-53 210.7 136 74.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 9.5e-53 210.3 135 76.3
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 1.2e-52 209.9 137 72.3
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.2e-52 209.9 135 73.3
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.2e-52 209.9 136 73.5
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 1.6e-52 209.5 136 73.5
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 1.6e-52 209.5 133 75.2
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.6e-52 209.5 135 73.3
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 6.1e-52 207.6 133 73.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 8.0e-52 207.2 135 71.9
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.0e-51 206.8 134 74.6
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.0e-51 206.8 136 72.1
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.8e-51 206.1 138 71.7
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.3e-51 205.7 138 71.0
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 2.3e-51 205.7 136 71.3
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 4.0e-51 204.9 135 71.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.0e-51 204.9 128 78.1
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.2e-50 203.4 134 73.1
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 2.0e-50 202.6 135 72.6
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 2.0e-50 202.6 133 71.4
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 3.4e-50 201.8 131 70.2
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 8.3e-49 197.2 135 69.6
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.0e-48 194.1 138 66.7
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 1.2e-47 193.4 133 71.4
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.9e-45 186.0 136 65.4
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 2.8e-44 182.2 136 68.4
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 2.4e-40 169.1 131 61.8
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 4.1e-40 168.3 114 72.8
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.7e-39 165.6 157 56.1
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 5.0e-38 161.4 129 59.7
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 5.6e-37 157.9 129 55.8
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 3.6e-36 155.2 95 80.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 6.2e-36 154.5 101 75.2
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 8.1e-36 154.1 133 60.2
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.8e-35 152.9 131 61.1
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.2e-35 151.4 157 54.1
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 5.2e-35 151.4 96 74.0
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 9.8e-34 147.1 135 60.7
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 9.8e-34 147.1 102 68.6
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 2.4e-32 142.5 94 70.2
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.1e-32 141.0 135 57.8
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-31 139.4 137 56.9
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.3e-30 136.7 97 66.0
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.2e-28 127.9 135 54.8
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.4e-24 116.7 96 60.4
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 6.6e-22 107.8 135 45.9
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 5.6e-21 104.8 133 42.1
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.2e-20 103.6 90 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 5.2e-19 98.2 117 41.9
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.5e-18 96.7 62 71.0
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 3.4e-18 95.5 135 43.7
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 3.8e-17 92.0 62 67.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 4.9e-17 91.7 126 38.9
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 4.2e-16 88.6 60 68.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 7.3e-13 77.8 44 79.5
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 4.8e-12 75.1 40 85.0
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 5.8e-10 68.2 37 81.1
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.3e-09 67.0 41 80.5
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.6e-07 60.1 31 87.1
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 3.9e-06 55.5 67 43.3


User provided reference genes

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