Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.7e-54 215.7 107 100.0
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 3.0e-38 161.8 107 78.5
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.4e-32 142.1 108 71.3
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 4.8e-20 101.3 118 52.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 4.8e-20 101.3 90 63.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 8.1e-20 100.5 81 64.2
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.1e-19 100.1 85 62.4
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 1.4e-19 99.8 121 50.4
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 1.8e-19 99.4 76 68.4
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.4e-19 99.0 91 62.6
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 2.4e-19 99.0 90 62.2
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 5.3e-19 97.8 107 55.1
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 9.0e-19 97.1 123 48.8
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 1.2e-18 96.7 78 61.5
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 2.0e-18 95.9 123 46.3
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 2.6e-18 95.5 97 58.8
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 3.4e-18 95.1 97 58.8
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 4.5e-18 94.7 116 50.0
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 5.8e-18 94.4 86 59.3
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 5.8e-18 94.4 102 54.9
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 7.6e-18 94.0 75 64.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 9.9e-18 93.6 120 48.3
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 9.9e-18 93.6 121 46.3
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 9.9e-18 93.6 121 46.3
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.9e-18 93.6 71 69.0
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 9.9e-18 93.6 75 62.7
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.3e-17 93.2 77 64.9
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.3e-17 93.2 77 64.9
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.7e-17 92.8 74 64.9
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 2.2e-17 92.4 78 64.1
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 2.9e-17 92.0 76 65.8
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 3.8e-17 91.7 107 52.3
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 4.9e-17 91.3 106 51.9
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.4e-16 89.7 72 65.3
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 1.9e-16 89.4 121 47.1
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.9e-16 89.4 107 53.3
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 1.9e-16 89.4 71 64.8
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 2.4e-16 89.0 106 51.9
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 2.4e-16 89.0 83 59.0
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 2.4e-16 89.0 101 52.5
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 3.2e-16 88.6 87 59.8
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 7.1e-16 87.4 104 51.0
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 9.3e-16 87.0 76 60.5
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 9.3e-16 87.0 121 46.3
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 9.3e-16 87.0 107 52.3
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.2e-15 86.7 75 66.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 2.7e-15 85.5 78 60.3
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 2.7e-15 85.5 82 56.1
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 6.0e-15 84.3 74 62.2
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 7.9e-15 84.0 76 61.8
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 7.9e-15 84.0 74 59.5
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 1.3e-14 83.2 102 51.0
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 1.8e-14 82.8 90 53.3
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 3.0e-14 82.0 118 47.5
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 3.0e-14 82.0 86 54.7
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 6.7e-14 80.9 110 46.4
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 1.1e-13 80.1 70 65.7
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.5e-13 79.7 77 61.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.5e-13 79.7 110 49.1
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.5e-13 79.7 111 45.9
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 2.5e-13 79.0 94 47.9
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.3e-13 78.2 114 46.5
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 9.6e-13 77.0 119 47.1
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 8.2e-12 73.9 75 56.0
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 1.7e-09 66.2 105 45.7
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.5e-09 64.3 71 54.9
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.5e-09 64.3 71 54.9
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.4e-08 63.2 75 50.7
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 4.2e-08 61.6 77 49.4
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 9.3e-08 60.5 76 52.6
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 9.3e-08 60.5 89 43.8


User provided reference genes

Program Settings