Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.1e-65 253.1 120 100.0
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 3.8e-58 228.0 120 90.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.2e-57 224.9 120 85.0
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.1e-57 223.8 119 84.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 9.3e-57 223.4 119 84.0
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.6e-56 222.6 120 83.3
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 4.6e-56 221.1 119 83.2
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 4.6e-56 221.1 119 83.2
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 6.0e-56 220.7 120 84.2
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 7.9e-56 220.3 119 82.4
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.9e-56 220.3 119 83.2
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.0e-55 219.9 120 83.3
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 81.5
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 5.1e-55 217.6 120 84.2
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 6.7e-55 217.2 120 83.3
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 6.7e-55 217.2 120 81.7
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 8.7e-55 216.9 121 84.3
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.1e-54 216.5 120 80.8
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.5e-54 216.1 120 82.5
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.9e-54 215.7 118 83.1
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.9e-54 215.7 120 81.7
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 1.9e-54 215.7 120 83.3
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 2.5e-54 215.3 120 82.5
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 4.3e-54 214.5 120 81.7
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 5.7e-54 214.2 118 83.1
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 7.4e-54 213.8 120 81.7
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 7.4e-54 213.8 120 80.8
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.6e-53 212.6 120 81.7
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.2e-53 212.2 120 80.8
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 2.2e-53 212.2 120 82.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 3.7e-53 211.5 120 80.0
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 8.2e-53 210.3 120 80.8
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 8.2e-53 210.3 120 78.3
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.4e-52 209.5 120 80.0
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 2.4e-52 208.8 120 79.2
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 3.1e-52 208.4 120 80.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 3.1e-52 208.4 118 81.4
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 4.1e-52 208.0 120 80.8
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 6.9e-52 207.2 120 79.2
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.9e-52 207.2 119 79.8
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 9.0e-52 206.8 120 79.2
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.2e-51 206.5 120 81.7
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.2e-51 206.5 118 80.5
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.5e-51 206.1 122 81.1
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.5e-51 206.1 122 81.1
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.5e-51 206.1 122 81.1
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.5e-51 206.1 120 80.0
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 2.6e-51 205.3 122 81.1
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 5.9e-51 204.1 121 80.2
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 5.9e-51 204.1 120 75.0
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 5.9e-51 204.1 120 77.5
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 80.3
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 7.7e-51 203.8 123 80.5
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 120 80.0
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 2.9e-50 201.8 123 78.9
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.1e-49 199.9 127 76.4
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 1.9e-49 199.1 120 76.7
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.9e-49 199.1 116 78.4
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 4.2e-49 198.0 118 78.0
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 2.1e-48 195.7 121 78.5
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.3e-47 192.2 125 72.8
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 3.9e-47 191.4 115 75.7
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 3.9e-47 191.4 119 77.3
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 5.1e-47 191.0 116 75.0
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.1e-46 189.9 116 75.0
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 2.5e-46 188.7 116 74.1
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 2.5e-46 188.7 125 71.2
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 3.3e-46 188.3 116 74.1
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 3.3e-46 188.3 116 74.1
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.3e-46 188.3 134 69.4
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 4.3e-46 188.0 116 74.1
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 5.7e-46 187.6 116 73.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 5.7e-46 187.6 116 73.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 5.7e-46 187.6 116 73.3
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 7.4e-46 187.2 116 73.3
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 7.4e-46 187.2 116 73.3
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 7.4e-46 187.2 91 96.7
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.3e-45 186.4 118 72.0
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.6e-40 168.3 88 86.4
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 3.6e-40 168.3 115 67.0
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 7.9e-40 167.2 130 64.6
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.0e-39 166.8 91 83.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.0e-39 166.8 91 84.6
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.8e-39 166.0 118 66.9
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 3.9e-39 164.9 87 83.9
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 3.9e-39 164.9 92 83.7
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 1.1e-38 163.3 91 81.3
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 3.3e-38 161.8 88 81.8
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 4.4e-38 161.4 97 77.3
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 5.7e-38 161.0 86 82.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 7.4e-38 160.6 86 82.6
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.8e-36 156.0 88 81.8
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 5.3e-36 154.5 84 83.3
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 7.0e-36 154.1 91 78.0
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 7.0e-36 154.1 91 78.0
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 7.0e-36 154.1 88 79.5
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.2e-35 153.3 115 60.9
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 5.9e-35 151.0 76 88.2
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 7.7e-35 150.6 115 63.5
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 7.7e-35 150.6 115 63.5
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 1.3e-34 149.8 86 76.7
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.2e-34 149.1 88 77.3
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.8e-34 148.3 88 73.9
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 7.2e-33 144.1 100 68.0
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 9.4e-33 143.7 77 85.7
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 1.6e-32 142.9 98 69.4
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 6.1e-32 141.0 101 67.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 2.0e-30 136.0 97 70.1
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 2.6e-30 135.6 90 70.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 6.5e-26 120.9 88 62.5
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.2e-22 110.2 65 73.8
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 1.7e-18 96.3 54 79.6
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.9e-17 92.8 109 42.2
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.2e-16 90.1 120 47.5
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.4e-14 82.0 115 40.9
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 1.3e-13 80.1 128 34.4
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 5.9e-11 71.2 146 32.2
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 3.8e-10 68.6 30 96.7
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 3.6e-08 62.0 33 84.8
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 3.0e-07 58.9 31 80.6


User provided reference genes

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