Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 0.0e+00 1313.5 690 100.0
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 9.4e-295 1016.5 686 79.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 7.0e-290 1000.3 684 78.8
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 6.2e-246 854.4 699 67.4
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.2e-236 823.5 719 65.4
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 1.5e-236 823.2 718 64.8
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.3e-235 820.1 710 63.7
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 8.4e-235 817.4 713 64.0
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.5e-233 812.0 726 64.3
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 5.1e-232 808.1 721 63.4
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 4.3e-231 805.1 721 63.1
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.3e-230 803.5 733 63.0
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.3e-230 803.5 705 63.3
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 2.4e-229 799.3 728 63.5
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 2.4e-229 799.3 727 61.8
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.4e-229 799.3 707 62.9
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 5.3e-229 798.1 710 62.8
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.5e-228 796.6 699 63.8
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 4.5e-228 795.0 710 62.4
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 5.8e-228 794.7 708 63.6
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.3e-227 793.5 733 62.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.3e-227 793.5 708 63.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.7e-227 793.1 711 62.2
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 4.9e-227 791.6 718 62.3
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.9e-226 789.6 712 61.0
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.5e-226 789.3 712 61.5
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 3.2e-226 788.9 715 63.4
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 9.3e-226 787.3 712 61.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 9.3e-226 787.3 713 61.7
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.1e-225 786.2 722 60.9
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 7.9e-225 784.3 735 61.5
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 2.3e-224 782.7 707 62.0
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.0e-224 782.3 716 61.7
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.0e-224 782.3 710 62.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.9e-224 781.9 719 62.0
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 5.1e-224 781.6 708 61.3
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 5.1e-224 781.6 729 61.3
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 8.7e-224 780.8 698 62.2
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.5e-223 780.0 718 62.8
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 9.6e-223 777.3 713 61.9
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.6e-222 776.5 716 62.6
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 2.8e-222 775.8 714 60.8
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 6.2e-222 774.6 712 60.4
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.8e-221 773.1 689 62.6
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.8e-221 773.1 689 62.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.4e-221 772.7 709 61.6
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.1e-221 772.3 711 62.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 5.3e-221 771.5 706 61.6
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 6.9e-221 771.2 711 62.9
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 9.0e-221 770.8 701 63.5
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.5e-220 770.0 711 62.7
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.0e-220 769.6 699 60.5
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.5e-220 768.5 711 62.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.8e-220 768.1 689 62.0
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.9e-219 765.0 711 62.0
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-217 759.6 709 61.6
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.9e-215 753.1 732 58.2
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 4.3e-215 751.9 719 59.4
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.4e-215 751.1 720 59.9
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 7.4e-215 751.1 717 59.1
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.3e-214 748.0 709 60.9
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 1.4e-213 746.9 700 59.7
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 2.4e-213 746.1 718 59.5
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 4.1e-213 745.3 714 60.4
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.3e-213 745.0 713 59.7
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 6.9e-213 744.6 717 59.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.2e-212 743.8 797 55.3
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-211 740.3 724 59.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 2.2e-211 739.6 704 60.5
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 8.5e-211 737.6 712 57.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.1e-209 733.0 711 57.1
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.1e-208 728.4 632 62.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 5.1e-208 728.4 740 58.4
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.8e-206 722.6 935 49.1
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.1e-205 720.7 707 58.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.8e-200 703.4 726 57.2
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.2e-196 690.6 715 56.8
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 8.5e-195 684.5 710 56.2
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 4.2e-194 682.2 753 54.2
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.2e-194 682.2 922 47.9
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.6e-193 680.2 707 57.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 2.7e-193 679.5 706 55.1
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.0e-192 677.6 700 54.9
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.4e-192 677.2 702 55.0
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.4e-192 677.2 709 55.1
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 3.0e-192 676.0 711 55.8
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.5e-191 673.7 706 54.2
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 2.6e-191 672.9 701 54.8
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.7e-190 670.2 698 54.7
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 2.8e-190 669.5 734 55.6
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.4e-189 666.4 720 53.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.0e-187 661.0 730 52.5
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.3e-187 660.6 703 53.8
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 7.2e-186 654.8 595 61.7
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.8e-184 650.2 732 53.4
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.2e-177 627.5 560 63.0
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.6e-177 625.9 614 58.0
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 8.0e-177 624.8 609 58.5
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.7e-166 590.5 588 57.3
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 4.0e-160 569.3 576 58.0
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 5.8e-159 565.5 554 59.6
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 5.4e-149 532.3 698 48.1
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 5.6e-146 522.3 578 53.1
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.2e-142 510.4 538 54.3
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.6e-137 493.0 500 57.8
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.2e-126 457.2 758 40.4
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 7.9e-124 448.7 779 37.6
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 5.1e-107 392.9 683 37.0
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 3.0e-99 367.1 288 67.4
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.0e-94 352.1 261 67.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 8.8e-83 312.4 443 46.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 4.4e-74 283.5 468 44.7
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 7.2e-69 266.2 445 41.3
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.3e-59 234.6 195 64.6
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 3.5e-55 220.7 301 45.5
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.8e-48 198.4 182 58.2
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.9e-46 190.7 148 75.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 6.6e-46 189.9 282 43.6
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 2.1e-44 184.9 144 70.1
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 3.1e-43 181.0 154 58.4
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 7.8e-39 166.4 338 37.9
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 4.9e-33 147.1 121 72.7
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 9.2e-32 142.9 128 66.4
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.1e-29 136.0 97 70.1
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.6e-28 132.1 121 63.6
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.0e-26 125.2 108 67.6
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 1.2e-23 115.9 109 61.5
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 2.5e-21 108.2 109 51.4
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.6e-12 79.0 144 38.2
CARHR051520 Cardamine hirsuta HOM05D003178 ORTHO05D003636 3.9e-06 57.8 179 22.9
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 5.1e-06 57.4 35 80.0


User provided reference genes

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