Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 4.6e-73 278.1 172 100.0
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.3e-51 206.8 172 71.5
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 9.3e-42 174.1 176 61.4
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 2.1e-41 172.9 176 59.1
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 3.5e-41 172.2 176 59.1
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 7.9e-41 171.0 175 58.9
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 3.9e-40 168.7 178 61.2
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 3.9e-40 168.7 176 67.6
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 8.7e-40 167.5 175 64.6
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.1e-39 167.2 174 59.8
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.1e-39 167.2 175 60.0
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 1.5e-39 166.8 175 60.0
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 3.3e-39 165.6 175 56.0
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 3.3e-39 165.6 183 57.9
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.3e-39 165.2 175 64.0
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.6e-39 164.9 174 60.9
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.6e-38 163.3 179 56.4
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.6e-38 163.3 175 57.1
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 3.7e-38 162.2 176 54.5
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 6.2e-38 161.4 171 64.9
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 8.2e-38 161.0 183 54.6
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.4e-37 160.2 176 59.1
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.8e-37 159.8 183 54.1
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.8e-37 159.8 185 62.7
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 2.4e-37 159.5 176 55.1
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 3.1e-37 159.1 179 53.6
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 3.1e-37 159.1 172 54.7
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 6.9e-37 157.9 182 62.1
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 6.9e-37 157.9 175 56.0
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 9.0e-37 157.5 169 55.6
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.0e-36 156.4 174 62.6
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 3.4e-36 155.6 174 59.2
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.5e-36 155.2 178 57.9
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 5.8e-36 154.8 176 64.8
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.7e-35 153.3 175 55.4
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 1.7e-35 153.3 184 57.6
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 2.9e-35 152.5 177 52.0
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 2.9e-35 152.5 179 55.3
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 8.4e-35 151.0 182 53.3
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 1.1e-34 150.6 178 55.1
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 1.1e-34 150.6 177 57.6
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 1.1e-34 150.6 180 52.2
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.4e-34 150.2 176 50.6
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.9e-34 149.8 176 54.5
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 4.2e-34 148.7 177 50.3
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 1.6e-33 146.7 177 49.7
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.6e-33 146.7 176 63.6
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 2.7e-33 146.0 175 54.3
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 6.0e-33 144.8 191 50.8
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.0e-32 144.1 176 52.8
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 1.3e-32 143.7 178 51.1
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 1.3e-32 143.7 173 50.9
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.3e-32 142.9 182 54.9
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 3.9e-32 142.1 176 62.5
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 3.9e-32 142.1 176 48.9
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 5.1e-32 141.7 175 49.7
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 8.7e-32 141.0 184 56.0
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 8.7e-32 141.0 174 54.6
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.5e-31 140.2 178 51.1
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 4.3e-31 138.7 175 53.1
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 5.7e-31 138.3 178 50.6
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 9.7e-31 137.5 166 51.8
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 9.7e-31 137.5 177 61.6
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.6e-30 136.7 272 43.8
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.2e-30 136.3 180 53.3
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 3.7e-30 135.6 197 54.3
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 8.2e-30 134.4 185 48.1
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 2.0e-28 129.8 167 59.9
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.3e-27 127.1 243 39.5
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 3.8e-27 125.6 137 56.2
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 3.8e-27 125.6 184 54.9
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 5.0e-27 125.2 172 58.1
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 6.5e-27 124.8 175 45.7
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 8.5e-27 124.4 175 50.9
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.9e-26 123.2 179 45.3
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 2.5e-26 122.9 168 57.7
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 2.5e-26 122.9 168 57.7
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 5.5e-26 121.7 223 40.4
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 1.6e-25 120.2 176 45.5
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 2.7e-25 119.4 173 46.2
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 6.1e-25 118.2 175 44.6
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 6.1e-25 118.2 173 46.8
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 6.1e-25 118.2 171 48.0
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 1.0e-24 117.5 168 46.4
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.0e-24 117.5 174 54.0
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.8e-24 116.7 150 61.3
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 8.7e-24 114.4 168 45.8
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 8.7e-24 114.4 168 45.8
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.5e-23 113.6 168 46.4
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 2.5e-23 112.8 153 49.7
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 2.5e-23 112.8 180 44.4
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 5.7e-23 111.7 166 44.0
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 2.2e-22 109.8 174 43.7
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 8.2e-22 107.8 169 47.9
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 1.4e-21 107.1 175 40.6
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 2.4e-21 106.3 156 47.4
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 4.1e-21 105.5 169 51.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 9.1e-21 104.4 213 36.2
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 3.4e-20 102.4 141 48.9
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 4.5e-20 102.1 94 62.8
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.2e-19 99.8 185 37.8
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 8.5e-19 97.8 104 59.6
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.9e-18 96.7 152 41.4
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.0e-16 89.4 94 63.8
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 3.9e-16 89.0 182 47.8
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.9e-16 89.0 94 62.8
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 4.8e-14 82.0 56 73.2
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.4e-13 79.7 110 50.0
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.4e-13 79.7 110 50.0
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 5.5e-10 68.6 168 41.7
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 9.4e-10 67.8 177 32.8
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.2e-09 67.4 54 59.3
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 2.7e-09 66.2 97 48.5
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.6e-09 65.9 71 54.9
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 6.1e-09 65.1 51 64.7


User provided reference genes

Program Settings