Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.4e-152 543.1 307 100.0
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 3.2e-125 452.2 252 90.1
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.1e-121 439.5 325 72.6
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.9e-110 402.5 253 77.9
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.9e-109 399.8 257 77.0
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.1e-109 398.7 253 77.5
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 4.1e-109 398.7 253 77.5
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 4.1e-109 398.7 253 77.5
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 7.1e-109 397.9 253 77.5
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.0e-107 394.0 253 75.5
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.5e-106 390.2 258 75.6
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.5e-106 389.4 256 74.6
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 4.3e-106 388.7 256 73.4
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.3e-106 388.7 255 75.7
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 9.6e-106 387.5 253 75.5
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.1e-105 386.3 255 75.3
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.1e-105 386.3 257 75.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 2.8e-105 386.0 256 75.0
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 1.1e-104 384.0 257 75.5
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 4.0e-104 382.1 257 73.5
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 6.8e-104 381.3 256 73.0
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 6.8e-104 381.3 256 73.4
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.9e-104 380.9 267 71.9
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 6.4e-102 374.8 252 73.8
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.4e-102 374.4 254 73.2
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 1.9e-101 373.2 256 73.0
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 9.3e-101 370.9 257 72.8
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 9.3e-101 370.9 253 70.4
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.6e-100 370.2 253 73.5
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.6e-100 370.2 256 73.0
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 3.5e-100 369.0 255 73.7
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 4.6e-100 368.6 253 71.5
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.6e-100 368.6 255 72.5
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 7.8e-100 367.9 253 70.4
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.0e-99 367.5 256 70.7
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.0e-99 367.5 294 65.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.7e-99 366.7 256 72.3
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 3.9e-99 365.5 256 71.1
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 5.1e-99 365.2 255 72.2
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 6.6e-99 364.8 254 72.8
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.5e-98 363.6 255 71.4
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 3.3e-98 362.5 258 71.3
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 4.3e-98 362.1 256 71.9
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 5.6e-98 361.7 261 69.3
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 9.6e-98 360.9 257 68.9
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.3e-97 360.5 253 73.9
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.3e-97 360.5 261 69.0
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.6e-97 360.1 252 71.0
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 2.8e-97 359.4 252 71.0
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-97 359.4 252 71.0
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-97 359.4 252 71.0
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 6.2e-97 358.2 254 72.8
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 6.2e-97 358.2 257 70.4
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 8.1e-97 357.8 259 69.9
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.4e-96 357.1 252 70.6
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 2.4e-96 356.3 257 71.2
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 2.0e-95 353.2 259 71.8
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 2.6e-95 352.8 253 71.1
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 5.8e-95 351.7 253 69.2
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 2.2e-94 349.7 253 70.8
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 2.2e-94 349.7 257 70.0
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 3.8e-94 349.0 260 67.7
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 6.4e-94 348.2 255 69.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 6.4e-94 348.2 259 69.1
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.1e-92 343.2 258 68.6
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 3.5e-92 342.4 256 68.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 6.0e-92 341.7 257 68.9
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 7.9e-92 341.3 258 68.6
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 7.9e-92 341.3 265 65.3
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 1.3e-91 340.5 257 68.1
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 6.6e-91 338.2 257 67.7
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 6.6e-91 338.2 232 74.1
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 8.7e-91 337.8 257 67.7
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.5e-90 337.0 260 68.1
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.5e-90 337.0 254 67.3
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.9e-90 336.7 252 68.3
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.9e-90 336.7 260 66.9
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.9e-90 336.7 260 66.9
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 5.6e-90 335.1 260 66.5
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 5.6e-90 335.1 260 66.5
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 7.4e-90 334.7 225 71.1
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.3e-89 334.0 284 61.6
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 2.8e-89 332.8 255 65.5
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.8e-89 332.8 232 71.6
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.8e-89 332.8 259 68.0
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 1.3e-86 323.9 260 62.7
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 1.3e-86 323.9 258 65.9
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.2e-86 323.2 239 68.6
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 3.0e-83 312.8 212 75.0
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.9e-82 310.1 196 77.0
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.3e-82 309.3 228 71.1
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.6e-82 308.5 216 69.9
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 9.0e-80 301.2 208 71.2
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.2e-78 296.6 176 80.7
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 5.1e-75 285.4 172 80.8
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 3.7e-73 279.3 225 64.0
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 6.3e-73 278.5 219 68.0
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.4e-72 277.3 259 57.1
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 9.0e-72 274.6 265 57.4
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.0e-67 259.6 170 78.8
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 9.7e-66 254.6 181 69.6
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 3.7e-65 252.7 201 58.7
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 4.1e-64 249.2 235 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 3.4e-63 246.1 196 60.7
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 5.5e-61 238.8 167 71.9
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.8e-56 223.8 208 53.4
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.2e-52 211.1 170 64.1
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 4.4e-50 202.6 252 45.2
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.6e-42 176.8 237 46.4
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 3.1e-40 169.9 234 39.7
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 4.1e-40 169.5 237 40.9
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.7e-39 165.2 121 64.5
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.9e-30 136.7 91 73.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 3.8e-30 136.3 120 54.2
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 3.8e-30 136.3 87 78.2
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 6.8e-27 125.6 78 71.8
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 2.3e-22 110.5 60 88.3
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.1e-20 104.0 68 77.9
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 4.4e-10 69.7 37 86.5
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.7e-07 60.5 132 30.3


User provided reference genes

Program Settings