Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 0.0e+00 1102.0 536 100.0
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.6e-270 935.6 480 95.4
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 1.5e-268 929.1 477 94.5
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.9e-263 912.1 483 90.9
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.3e-263 911.4 480 89.8
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.3e-263 911.4 480 91.0
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.3e-263 911.4 480 91.2
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 9.7e-263 909.8 478 92.5
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.3e-262 909.4 479 93.1
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 1.6e-262 909.1 480 92.1
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 1.6e-262 909.1 480 92.1
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 6.3e-262 907.1 480 91.7
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.2e-262 906.7 480 90.8
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 8.2e-262 906.7 477 90.8
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 1.1e-261 906.4 480 90.6
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.4e-261 906.0 480 90.4
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.8e-261 905.6 480 90.8
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.4e-261 905.2 477 90.8
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 4.1e-261 904.4 477 91.4
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 4.1e-261 904.4 487 90.3
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.1e-261 904.4 482 90.2
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 4.1e-261 904.4 480 91.2
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 5.3e-261 904.0 480 91.0
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 5.3e-261 904.0 478 91.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 5.3e-261 904.0 478 90.8
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 6.9e-261 903.7 480 91.0
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 6.9e-261 903.7 480 91.7
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 6.9e-261 903.7 480 91.9
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 9.0e-261 903.3 480 89.8
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 9.0e-261 903.3 478 90.8
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.2e-260 902.9 480 91.2
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 1.5e-260 902.5 480 91.2
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 2.0e-260 902.1 477 90.6
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 4.5e-260 901.0 480 91.7
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 5.9e-260 900.6 480 90.2
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 1.0e-259 899.8 477 91.2
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.0e-259 899.8 480 90.6
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.0e-259 899.8 480 90.8
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.7e-259 899.0 480 89.8
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.7e-259 899.0 480 89.6
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 2.2e-259 898.7 480 90.8
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 2.2e-259 898.7 480 90.6
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 2.2e-259 898.7 485 89.9
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 2.9e-259 898.3 480 90.6
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 2.9e-259 898.3 482 91.1
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 2.9e-259 898.3 480 91.7
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 3.8e-259 897.9 477 90.1
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 6.5e-259 897.1 481 90.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 6.5e-259 897.1 478 90.8
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 6.5e-259 897.1 480 90.2
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 6.5e-259 897.1 480 91.9
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.5e-259 897.1 480 90.6
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 6.5e-259 897.1 493 87.6
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 8.5e-259 896.7 478 91.0
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 8.5e-259 896.7 481 89.8
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 8.5e-259 896.7 480 90.4
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 1.1e-258 896.3 480 90.0
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.1e-258 896.3 480 90.2
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.4e-258 896.0 480 90.6
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 1.4e-258 896.0 480 90.4
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 1.4e-258 896.0 478 90.8
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.4e-258 896.0 477 89.9
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 1.4e-258 896.0 481 91.7
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 1.9e-258 895.6 480 89.8
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 1.9e-258 895.6 480 90.2
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.2e-258 894.8 478 90.8
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.2e-258 894.8 480 89.2
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.2e-258 894.8 480 90.4
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.2e-258 894.4 489 88.5
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.5e-258 894.0 480 90.0
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 5.5e-258 894.0 480 90.4
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 9.4e-258 893.3 477 90.4
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 1.2e-257 892.9 479 91.0
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 1.2e-257 892.9 477 89.7
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 1.6e-257 892.5 480 90.6
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 2.1e-257 892.1 480 89.6
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.7e-257 891.7 480 90.0
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.6e-257 891.3 480 90.2
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 4.6e-257 891.0 480 89.8
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 6.1e-257 890.6 482 90.2
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.4e-256 889.4 477 89.3
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.4e-256 889.4 480 89.8
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 1.8e-256 889.0 480 89.4
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 3.0e-256 888.3 480 89.4
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.9e-256 887.9 478 90.6
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 6.7e-256 887.1 478 89.7
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 6.7e-256 887.1 480 90.0
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 6.7e-256 887.1 480 89.0
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 6.7e-256 887.1 477 89.1
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.5e-255 885.9 479 88.5
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 2.0e-255 885.6 480 89.8
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 2.0e-255 885.6 480 87.9
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 2.5e-255 885.2 473 91.8
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 3.3e-255 884.8 486 89.3
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 4.3e-255 884.4 473 91.8
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 5.7e-255 884.0 478 89.1
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 7.4e-255 883.6 481 89.4
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.3e-254 882.9 477 89.3
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 2.2e-254 882.1 477 89.9
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 4.8e-254 880.9 485 89.1
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 4.8e-254 880.9 467 90.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 1.1e-253 879.8 481 89.0
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 6.9e-253 877.1 477 89.1
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 9.1e-253 876.7 472 90.7
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.6e-252 875.2 446 93.3
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 3.4e-252 874.8 479 89.1
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 3.6e-249 864.8 460 90.4
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.4e-245 852.8 453 91.4
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.2e-244 849.7 451 90.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.5e-244 848.2 480 86.7
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.8e-243 844.7 486 85.0
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.4e-240 836.3 430 90.5
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.1e-239 833.2 477 84.1
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 7.5e-239 830.5 430 88.1
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.7e-236 822.0 430 88.1
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.3e-235 819.7 430 88.1
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.9e-234 815.8 401 94.8
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 9.4e-234 813.5 401 94.8
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 3.6e-233 811.6 402 94.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.0e-232 810.1 401 94.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 5.2e-232 807.7 401 94.0
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.7e-227 792.7 429 86.0
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 9.8e-223 776.9 480 80.6
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 2.0e-220 769.2 378 95.8
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 1.3e-219 766.5 420 83.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 2.5e-218 762.3 427 82.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 6.1e-217 757.7 423 83.5
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 3.3e-210 735.3 392 89.0
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 6.0e-204 714.5 393 87.5
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.6e-201 706.4 474 75.7
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.8e-192 676.4 369 88.9
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.5e-188 662.1 346 90.5
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.3e-182 643.7 395 74.4
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.0e-179 632.5 480 69.6
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 7.6e-175 617.8 309 94.2
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.3e-170 602.1 480 67.3
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.6e-169 600.1 480 67.1
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-167 594.0 480 66.9
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 6.0e-164 581.6 331 86.4
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.7e-146 521.9 279 88.2
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.6e-140 502.3 351 72.1
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 2.1e-124 450.3 275 75.3
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.0e-114 417.2 203 96.1
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.3e-97 361.3 180 92.2
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.2e-95 354.8 222 77.9
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.7e-89 334.3 166 95.2
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 3.5e-87 326.6 162 93.8
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 5.2e-83 312.8 486 41.2
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 2.0e-74 284.3 146 90.4
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 2.8e-68 263.8 146 86.3
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.3e-65 255.0 165 80.6
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 1.6e-63 248.1 121 96.7
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.0e-62 245.4 127 89.8
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 3.1e-59 233.8 151 80.1
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.6e-55 219.9 259 45.2
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 5.3e-51 206.5 100 94.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.8e-49 200.3 102 92.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 8.4e-49 199.1 145 73.1
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.8e-35 154.8 102 76.5
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.1e-35 153.7 108 69.4
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 2.5e-32 144.4 70 97.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.5e-32 144.4 70 97.1
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.3e-28 132.1 197 37.6
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.4e-27 127.9 64 95.3
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 2.6e-26 124.4 62 96.8
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.6e-26 124.4 64 92.2
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.5e-26 123.6 65 89.2
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.5e-26 123.6 65 89.2
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.5e-24 116.7 59 93.2
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.2e-23 115.5 59 91.5
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 5.1e-22 110.2 67 71.6
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.7e-22 109.8 83 66.3
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 2.2e-20 104.8 67 71.6
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.9e-16 91.7 48 87.5
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 7.2e-16 89.7 168 35.1
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 2.8e-12 77.8 69 59.4
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 8.2e-12 76.3 72 56.9
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.8e-11 75.1 72 56.9
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.7e-09 68.6 61 59.0
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 7.2e-08 63.2 60 68.3


User provided reference genes

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