Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 7.1e-196 687.2 374 100.0
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.2e-113 414.1 393 63.9
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 3.1e-106 389.4 437 57.2
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 1.9e-100 370.2 401 60.6
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 2.5e-100 369.8 437 54.2
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 7.3e-100 368.2 449 51.2
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 1.8e-98 363.6 446 55.8
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 1.8e-98 363.6 458 52.6
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 1.2e-97 360.9 440 53.2
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 4.4e-97 359.0 444 52.9
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 2.2e-96 356.7 447 49.0
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 4.9e-96 355.5 441 50.1
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 6.4e-96 355.1 440 50.9
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 7.1e-95 351.7 437 52.6
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 9.2e-95 351.3 447 50.3
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 2.7e-94 349.7 452 48.9
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.5e-94 349.4 389 55.3
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 7.8e-94 348.2 448 52.5
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 3.9e-93 345.9 444 50.7
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 5.1e-93 345.5 452 49.3
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 5.1e-93 345.5 452 49.3
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 8.7e-93 344.7 445 54.6
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.1e-92 344.4 439 52.6
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 7.3e-92 341.7 437 52.4
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 9.6e-92 341.3 451 51.4
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 2.1e-91 340.1 438 52.3
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.1e-91 340.1 460 49.3
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 2.1e-91 340.1 454 48.0
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 3.6e-91 339.3 432 53.9
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 3.6e-91 339.3 447 51.9
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 2.4e-90 336.7 437 47.6
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 4.0e-90 335.9 447 51.5
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 7.6e-89 331.6 434 52.3
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 7.6e-89 331.6 452 47.8
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 9.9e-89 331.3 452 47.6
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 1.7e-88 330.5 453 48.8
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 2.2e-88 330.1 449 50.6
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 6.4e-88 328.6 456 47.8
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 2.4e-87 326.6 438 50.5
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.7e-86 323.2 437 49.9
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.7e-86 323.2 437 49.9
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 1.0e-85 321.2 448 52.2
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 1.3e-85 320.9 433 48.7
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.3e-85 320.9 448 51.3
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 2.3e-85 320.1 442 48.9
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 6.6e-85 318.5 450 46.2
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 6.6e-85 318.5 450 47.8
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 8.7e-85 318.2 441 53.1
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 6.2e-83 312.0 451 47.5
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 6.2e-83 312.0 436 48.2
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 8.1e-83 311.6 439 46.0
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 8.1e-83 311.6 448 51.6
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 4.0e-82 309.3 458 48.9
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 5.3e-82 308.9 435 52.4
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 5.8e-81 305.4 428 51.2
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 7.6e-81 305.1 439 49.2
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 6.0e-78 295.4 435 52.9
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 2.3e-77 293.5 399 50.9
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.3e-75 287.7 428 50.0
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.6e-75 287.3 443 46.5
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 9.0e-74 281.6 452 44.9
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 2.0e-73 280.4 404 45.0
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 2.6e-73 280.0 440 44.1
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 3.4e-73 279.6 440 43.9
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 6.4e-72 275.4 379 43.8
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 7.1e-71 271.9 375 50.1
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 9.3e-71 271.6 410 42.0
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.0e-69 268.1 452 45.8
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 1.8e-69 267.3 438 45.4
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 2.3e-69 266.9 385 49.6
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 3.9e-69 266.2 395 43.3
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 1.8e-66 257.3 405 44.7
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 1.3e-64 251.1 417 42.4
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 4.2e-55 219.5 449 40.1
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 1.4e-53 214.5 368 45.1
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 1.3e-51 208.0 137 69.3
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 1.3e-51 208.0 137 69.3
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 1.7e-51 207.6 228 51.3
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 5.1e-45 186.0 390 36.4
Nitab4.5_0000697g0020 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.5e-44 184.5 452 35.8
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 3.3e-44 183.3 406 37.2
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 4.4e-44 183.0 415 34.7
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 1.3e-43 181.4 391 39.6
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 2.2e-43 180.6 369 37.1
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 4.8e-43 179.5 354 35.6
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 3.1e-42 176.8 401 34.2
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 9.1e-42 175.3 381 37.5
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 1.2e-41 174.9 378 36.0
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.5e-41 174.5 373 35.7
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 2.6e-41 173.7 445 38.9
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 3.5e-41 173.3 381 37.3
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 7.7e-41 172.2 121 62.0
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.7e-40 171.0 406 35.2
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 5.0e-40 169.5 366 35.0
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 6.5e-40 169.1 403 32.0
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.1e-39 168.3 219 43.4
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 3.2e-39 166.8 412 35.2
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 5.5e-39 166.0 434 35.7
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 5.5e-39 166.0 395 32.4
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 9.4e-39 165.2 353 33.4
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 1.2e-38 164.9 361 35.5
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 2.1e-38 164.1 149 53.7
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 2.1e-38 164.1 117 59.8
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 2.7e-38 163.7 114 61.4
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 2.7e-38 163.7 151 52.3
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 2.7e-38 163.7 380 36.3
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 3.6e-38 163.3 382 37.2
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 6.1e-38 162.5 118 61.9
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 8.0e-38 162.2 114 62.3
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 8.0e-38 162.2 365 35.6
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 8.0e-38 162.2 114 60.5
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 1.0e-37 161.8 234 39.3
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 1.8e-37 161.0 378 34.1
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 1.8e-37 161.0 114 62.3
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 2.3e-37 160.6 366 32.8
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 2.3e-37 160.6 228 42.1
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 3.0e-37 160.2 149 51.7
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 3.0e-37 160.2 398 37.7
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 3.9e-37 159.8 114 64.0
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 5.2e-37 159.5 388 33.0
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 5.2e-37 159.5 361 36.6
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 6.7e-37 159.1 417 31.2
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 8.8e-37 158.7 205 42.9
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 8.8e-37 158.7 418 34.7
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 1.1e-36 158.3 155 49.7
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 1.5e-36 157.9 424 34.0
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.5e-36 157.9 405 33.6
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 2.6e-36 157.1 411 32.6
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 3.3e-36 156.8 409 35.5
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 3.3e-36 156.8 426 33.8
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.4e-36 156.4 116 57.8
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.4e-36 156.4 116 57.8
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 4.4e-36 156.4 404 31.7
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 5.7e-36 156.0 384 32.0
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 5.7e-36 156.0 419 31.5
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 5.7e-36 156.0 114 59.6
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 5.7e-36 156.0 136 52.2
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 5.7e-36 156.0 416 32.0
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 9.7e-36 155.2 126 57.1
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 9.7e-36 155.2 116 58.6
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 1.3e-35 154.8 420 33.1
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 1.3e-35 154.8 389 35.5
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 2.2e-35 154.1 389 37.8
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.2e-35 154.1 147 49.0
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 8.2e-35 152.1 410 31.5
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 8.2e-35 152.1 419 31.3
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 1.8e-34 151.0 417 32.1
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 7.0e-34 149.1 373 34.9
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 7.0e-34 149.1 121 52.9
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 9.1e-34 148.7 389 38.6
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 3.8e-32 143.3 121 53.7
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 5.5e-31 139.4 376 32.7
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 9.4e-31 138.7 408 33.8
unitig_45.g31538 Utricularia gibba HOM05D004237 ORTHO05D005002 2.7e-30 137.1 215 41.4
unitig_578.g16512 Utricularia gibba HOM05D004237 ORTHO05D005002 2.7e-30 137.1 215 41.4
TPR.G11942 Trifolium pratense HOM05D004237 ORTHO05D005002 2.4e-18 97.4 79 59.5
SHI01026 Sapria himalayana HOM05D004237 ORTHO05D005002 5.9e-17 92.8 358 33.0
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 5.9e-09 66.2 47 66.0
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 2.9e-08 63.9 300 33.0
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 6.6e-08 62.8 296 29.1
Lj6P390T29 Lonicera japonica HOM05D004237 ORTHO05D005002 2.8e-06 57.4 133 32.3
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 6.1e-06 56.2 300 30.7
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 6.1e-06 56.2 86 43.0


User provided reference genes

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