Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0483621 Helianthus annuus HOM05D055280 ORTHO05D008092 8.8e-75 283.5 139 100.0
HanXRQChr17g0538801 Helianthus annuus HOM05D055280 ORTHO05D008092 6.1e-68 260.8 128 100.0
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 2.6e-10 69.3 33 97.0
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 2.6e-10 69.3 33 97.0
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 2.9e-09 65.9 33 87.9
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 1.4e-08 63.5 33 87.9
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 3.5e-07 58.9 51 56.9
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 4.6e-07 58.5 52 57.7
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 4.6e-07 58.5 52 57.7
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 4.6e-07 58.5 52 57.7
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 4.6e-07 58.5 52 57.7
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 4.6e-07 58.5 51 56.9
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 4.6e-07 58.5 52 55.8
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 6.0e-07 58.2 32 78.1
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 6.0e-07 58.2 32 75.0
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 7.9e-07 57.8 52 55.8
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 7.9e-07 57.8 51 58.8
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 7.9e-07 57.8 33 81.8
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 1.0e-06 57.4 33 78.8
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 1.3e-06 57.0 32 84.4
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 1.3e-06 57.0 52 55.8
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 1.3e-06 57.0 52 55.8
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 1.3e-06 57.0 31 83.9
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 1.3e-06 57.0 33 78.8
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 1.3e-06 57.0 33 78.8
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 1.3e-06 57.0 33 78.8
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 1.7e-06 56.6 33 75.8
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 1.7e-06 56.6 52 53.8
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 1.7e-06 56.6 52 55.8
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 2.3e-06 56.2 33 78.8
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 2.3e-06 56.2 32 75.0
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 3.0e-06 55.8 33 75.8
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 3.0e-06 55.8 33 78.8
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 3.0e-06 55.8 32 75.0
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 3.9e-06 55.5 33 78.8
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 8.7e-06 54.3 33 72.7
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 8.7e-06 54.3 52 53.8


User provided reference genes

Program Settings