Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 3.6e-140 501.5 244 100.0
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 3.9e-110 401.7 244 79.1
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.1e-107 392.1 246 75.2
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 3.0e-94 349.0 222 72.1
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.8e-68 262.7 238 51.3
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.8e-68 262.7 241 52.3
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.8e-68 262.7 236 53.4
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 8.2e-68 261.2 239 52.3
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 3.1e-67 259.2 235 53.6
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 5.3e-67 258.5 237 51.5
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.2e-66 257.3 227 55.5
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.5e-66 255.4 235 51.9
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.9e-66 255.0 235 51.5
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.9e-66 255.0 235 51.9
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.5e-65 251.5 235 50.6
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.5e-65 251.5 235 51.5
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.1e-64 250.8 247 46.2
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 2.5e-64 249.6 236 51.3
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 5.5e-64 248.4 238 49.6
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 5.5e-64 248.4 221 52.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 9.4e-64 247.7 237 48.1
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.7e-63 245.4 228 50.9
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 4.7e-63 245.4 238 50.0
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 8.0e-63 244.6 241 49.8
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.8e-62 243.4 228 50.4
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 3.9e-62 242.3 218 54.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 5.2e-62 241.9 236 48.3
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 6.7e-62 241.5 236 49.6
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 8.8e-62 241.1 238 46.2
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.5e-61 240.4 238 48.3
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 2.6e-61 239.6 226 49.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.7e-61 238.4 239 48.5
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 5.7e-61 238.4 214 51.4
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 4.8e-60 235.3 236 47.9
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 8.2e-60 234.6 237 48.9
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.1e-59 234.2 237 46.4
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.4e-59 233.0 236 46.6
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 2.4e-59 233.0 236 46.2
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 7.0e-59 231.5 236 47.5
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.0e-58 229.9 241 46.9
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 2.6e-58 229.6 236 47.5
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 1.0e-57 227.6 238 46.6
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.3e-57 227.3 217 50.7
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 2.9e-57 226.1 243 47.3
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 3.8e-57 225.7 248 46.0
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 5.0e-57 225.3 237 47.3
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.9e-56 223.4 217 49.8
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.2e-56 222.6 238 43.7
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 4.2e-56 222.2 212 50.0
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 5.5e-56 221.9 238 45.0
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 9.4e-56 221.1 211 50.7
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.1e-55 219.9 219 46.6
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.1e-55 219.9 224 47.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.7e-55 218.8 225 45.3
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 6.1e-55 218.4 239 45.6
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.0e-54 217.6 239 46.0
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.4e-54 217.2 236 44.1
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.3e-54 216.5 224 46.9
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.0e-53 213.4 239 44.8
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 2.0e-53 213.4 224 43.3
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 4.4e-53 212.2 238 44.1
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 4.4e-53 212.2 233 45.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 7.5e-53 211.5 242 43.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 3.7e-52 209.1 247 45.3
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 6.3e-52 208.4 189 52.9
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.8e-51 206.8 238 42.4
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.6e-50 203.8 234 44.9
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 7.7e-50 201.4 255 40.0
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.9e-49 199.5 238 43.3
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.5e-49 198.4 226 39.8
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 3.2e-48 196.1 239 43.5
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 5.5e-48 195.3 239 43.5
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 2.1e-47 193.4 171 52.6
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 8.8e-46 188.0 238 41.6
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 8.8e-46 188.0 226 41.2
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 3.4e-45 186.0 229 41.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 2.2e-44 183.3 160 53.1
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 2.3e-41 173.3 243 37.9
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 4.2e-40 169.1 228 38.6
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.0e-38 164.5 227 39.6
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.3e-38 163.3 229 35.4
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 8.9e-38 161.4 183 44.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 6.3e-36 155.2 181 44.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 5.2e-30 135.6 96 59.4
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 9.8e-29 131.3 155 39.4
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 8.3e-28 128.3 149 40.3
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 7.0e-19 98.6 177 29.9
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 1.3e-17 94.4 70 62.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.2e-15 85.5 171 29.2
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.5e-13 80.9 86 37.2


User provided reference genes

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