Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 4.8e-166 587.8 304 100.0
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 7.1e-53 211.8 153 75.8
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 4.6e-52 209.1 217 53.5
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 3.4e-47 193.0 194 60.8
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 5.1e-43 179.1 300 42.3
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 6.7e-43 178.7 173 57.8
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 7.4e-42 175.3 160 61.2
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 1.3e-41 174.5 135 69.6
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.1e-41 173.7 127 73.2
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 2.1e-41 173.7 175 56.0
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 3.7e-41 172.9 121 76.0
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 4.8e-41 172.6 183 54.1
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 1.1e-40 171.4 132 70.5
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 1.4e-40 171.0 163 59.5
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 1.8e-40 170.6 114 78.1
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 3.1e-40 169.9 140 63.6
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 4.1e-40 169.5 194 53.1
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 4.1e-40 169.5 121 75.2
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 6.9e-40 168.7 121 72.7
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 9.0e-40 168.3 111 73.9
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.0e-39 167.2 220 48.2
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 3.4e-39 166.4 127 67.7
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.4e-39 166.4 127 67.7
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 3.4e-39 166.4 129 65.9
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 4.5e-39 166.0 132 68.9
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.5e-39 166.0 141 61.0
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 7.6e-39 165.2 196 51.5
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.6e-39 165.2 141 61.0
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.0e-38 164.9 141 61.0
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.3e-38 164.5 182 53.8
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.7e-38 164.1 127 66.9
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.2e-38 163.7 128 66.4
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 2.2e-38 163.7 127 66.1
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 2.2e-38 163.7 142 61.3
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.9e-38 163.3 127 66.1
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 5.0e-38 162.5 126 66.7
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 5.0e-38 162.5 172 54.1
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 5.0e-38 162.5 109 75.2
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 1.1e-37 161.4 143 62.2
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.9e-37 160.6 198 48.0
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.9e-37 160.6 172 52.3
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 2.5e-37 160.2 183 53.0
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 3.2e-37 159.8 134 64.2
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 3.2e-37 159.8 126 67.5
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 4.2e-37 159.5 99 76.8
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 4.2e-37 159.5 182 53.8
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 5.5e-37 159.1 124 66.1
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 5.5e-37 159.1 136 62.5
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 9.3e-37 158.3 99 74.7
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.2e-36 157.9 99 74.7
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.2e-36 157.9 99 74.7
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 1.2e-36 157.9 133 60.9
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 1.6e-36 157.5 99 73.7
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.6e-36 157.5 130 64.6
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 1.6e-36 157.5 145 58.6
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 4.6e-36 156.0 119 64.7
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 6.1e-36 155.6 201 45.8
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 6.1e-36 155.6 113 67.3
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 1.0e-35 154.8 109 68.8
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.0e-35 154.8 153 52.9
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.3e-35 154.5 193 47.7
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.8e-35 154.1 99 72.7
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.8e-35 154.1 132 61.4
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.8e-35 154.1 132 61.4
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 1.8e-35 154.1 114 66.7
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 3.9e-35 152.9 96 78.1
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 5.1e-35 152.5 128 64.1
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 8.7e-35 151.8 99 70.7
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.5e-34 151.0 149 54.4
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.5e-34 151.0 96 74.0
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.9e-34 150.6 120 66.7
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 9.7e-34 148.3 104 67.3
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.6e-33 147.5 314 36.0
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 3.7e-33 146.4 135 55.6
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 8.2e-33 145.2 113 60.2
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 1.1e-32 144.8 98 71.4
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 4.1e-32 142.9 87 80.5
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 9.0e-32 141.7 91 79.1
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.1e-29 134.8 87 72.4
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 1.2e-28 131.3 104 66.3
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 2.1e-28 130.6 92 72.8
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 1.0e-27 128.3 102 58.8
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 3.9e-27 126.3 103 57.3
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.7e-25 120.9 83 74.7
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 3.7e-25 119.8 115 61.7
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.8e-25 119.4 71 80.3
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 6.3e-25 119.0 93 62.4
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 8.2e-25 118.6 109 62.4
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 6.9e-24 115.5 101 63.4
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.1e-24 115.2 106 60.4
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 2.0e-23 114.0 94 57.4
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 3.4e-23 113.2 83 67.5
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 3.8e-22 109.8 130 50.0
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 6.1e-20 102.4 80 63.8
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.0e-19 101.7 96 55.2
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.8e-19 100.9 127 49.6
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.1e-16 89.7 106 50.9
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 2.2e-14 84.0 64 67.2
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 6.5e-14 82.4 87 54.0
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.9e-13 80.9 141 36.9
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 7.2e-13 79.0 70 60.0
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 1.6e-12 77.8 91 49.5
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 4.0e-11 73.2 115 41.7
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 4.0e-11 73.2 82 45.1
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 2.6e-10 70.5 87 43.7
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 1.7e-09 67.8 40 77.5
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 9.1e-08 62.0 144 30.6
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 5.9e-07 59.3 130 33.1
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 2.2e-06 57.4 101 32.7
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 2.2e-06 57.4 119 31.9


User provided reference genes

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