Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0480181 Helianthus annuus HOM05D017474 ORTHO05D011180 3.0e-176 621.7 309 100.0
HanXRQChr10g0293751 Helianthus annuus HOM05D006218 ORTHO05D007338 1.1e-120 437.2 287 82.2
ECA247G3408 Erigeron canadensis HOM05D006218 ORTHO05D007338 1.5e-53 214.2 322 42.9
ECA248G1377 Erigeron canadensis HOM05D017474 ORTHO05D011180 1.4e-43 181.0 227 41.4
Lsat_1_v5_gn_9_33980 Lactuca sativa HOM05D017474 ORTHO05D011180 1.3e-33 147.9 222 36.9
Lsat_1_v5_gn_9_33941 Lactuca sativa HOM05D017474 ORTHO05D011180 2.4e-32 143.7 225 36.0
Lsat_1_v5_gn_9_33841 Lactuca sativa HOM05D017474 ORTHO05D011180 1.3e-30 137.9 229 36.2
Lsat_1_v5_gn_2_69281 Lactuca sativa HOM05D006218 ORTHO05D007338 6.8e-27 125.6 70 78.6
HanXRQChr10g0293781 Helianthus annuus HOM05D017474 ORTHO05D011180 8.3e-25 118.6 231 34.2
Dinv31962 Davidia involucrata HOM05D006218 ORTHO05D007338 7.8e-23 112.1 69 72.5
FvH4_5g24880 Fragaria vesca HOM05D006218 ORTHO05D007338 7.8e-23 112.1 70 72.9
HanXRQChr14g0446721 Helianthus annuus HOM05D006218 ORTHO05D007338 3.0e-22 110.2 60 85.0
QL02p015030 Quercus lobata HOM05D006218 ORTHO05D007338 3.9e-22 109.8 69 71.0
QL02p015096 Quercus lobata HOM05D006218 ORTHO05D007338 3.9e-22 109.8 69 71.0
CiPaw.08G075100 Carya illinoinensis HOM05D006218 ORTHO05D007338 5.1e-22 109.4 69 68.1
Ah.04g161150 Amaranthus hybridus HOM05D006218 ORTHO05D007338 8.6e-22 108.6 78 64.1
Rhsim10G0062900 Rhododendron simsii HOM05D006218 ORTHO05D007338 8.6e-22 108.6 70 68.6
Thecc.08G062100 Theobroma cacao HOM05D006218 ORTHO05D007338 1.1e-21 108.2 69 68.1
TWI39G0099 Tripterygium wilfordii HOM05D006218 ORTHO05D007338 1.5e-21 107.8 69 65.2
CSS0036772 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 1.9e-21 107.5 69 68.1
CSS0043525 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 1.9e-21 107.5 69 68.1
EL10Ac4g09913 Beta vulgaris HOM05D006218 ORTHO05D007338 3.3e-21 106.7 78 61.5
AUR62000761 Chenopodium quinoa HOM05D006218 ORTHO05D007338 5.6e-21 105.9 78 62.8
MD16G1284000 Malus domestica HOM05D006218 ORTHO05D007338 7.3e-21 105.5 69 66.7
RcHm_v2.0_Chr6g0271871 Rosa chinensis HOM05D006218 ORTHO05D007338 9.5e-21 105.1 70 65.7
PGR083G1452 Punica granatum HOM05D006218 ORTHO05D007338 1.6e-20 104.4 69 65.2
GSVIVG01013390001 Vitis vinifera HOM05D006218 ORTHO05D007338 1.6e-20 104.4 69 68.1
Duzib041G0398 Durio zibethinus HOM05D006218 ORTHO05D007338 2.8e-20 103.6 69 66.7
Rhsim10G0066100 Rhododendron simsii HOM05D006218 ORTHO05D007338 3.6e-20 103.2 70 65.7
ECA234G4364 Erigeron canadensis HOM05D017474 ORTHO05D011180 4.7e-20 102.8 226 32.7
Prupe.5G009500 Prunus persica HOM05D006218 ORTHO05D007338 4.7e-20 102.8 69 65.2
RcHm_v2.0_Chr7g0215761 Rosa chinensis HOM05D006218 ORTHO05D007338 8.1e-20 102.1 70 64.3
Gohir.D05G181600 Gossypium hirsutum HOM05D006218 ORTHO05D007338 1.1e-19 101.7 68 63.2
Gorai.009G186600 Gossypium raimondii HOM05D006218 ORTHO05D007338 1.1e-19 101.7 68 63.2
Hma1.2p1_0060F.1_g032840 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 1.1e-19 101.7 69 59.4
Duzib093G0304 Durio zibethinus HOM05D006218 ORTHO05D007338 3.1e-19 100.1 69 63.8
SHI24507 Sapria himalayana HOM05D006218 ORTHO05D007338 6.8e-19 99.0 69 56.5
CANSAT80G1826 Cannabis sativa HOM05D006218 ORTHO05D007338 8.9e-19 98.6 69 60.9
Medtr2g100200 Medicago truncatula HOM05D006218 ORTHO05D007338 1.2e-18 98.2 70 62.9
TPR.G6568 Trifolium pratense HOM05D006218 ORTHO05D007338 1.5e-18 97.8 70 61.4
Ciclev10000757m.g Citrus clementina HOM05D006218 ORTHO05D007338 2.0e-18 97.4 69 62.3
DCAR_006421 Daucus carota HOM05D006218 ORTHO05D007338 2.0e-18 97.4 60 71.7
Cc00_g16990 Coffea canephora HOM05D006218 ORTHO05D007338 4.4e-18 96.3 69 62.3
Atru.BG.229.p Acer truncatum HOM05D006218 ORTHO05D007338 9.9e-18 95.1 69 60.9
Thhalv10003177m.g Eutrema salsugineum HOM05D006218 ORTHO05D007338 2.9e-17 93.6 69 56.5
FAN08G1989 Fragaria x ananassa HOM05D006218 ORTHO05D007338 4.9e-17 92.8 58 72.4
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 2.4e-16 90.5 57 68.4
Sed0014170 Sechium edule HOM05D006218 ORTHO05D007338 4.1e-16 89.7 69 62.3
SGA_v2.0_scaffold21G09648 Striga asiatica HOM05D006218 ORTHO05D007338 7.1e-16 89.0 68 52.9
AUR62005208 Chenopodium quinoa HOM05D006218 ORTHO05D007338 1.2e-15 88.2 56 66.1
MELO3C017038.2 Cucumis melo HOM05D006218 ORTHO05D007338 1.2e-15 88.2 69 60.9
ClCG11G018820 Citrullus lanatus HOM05D006218 ORTHO05D007338 1.6e-15 87.8 69 60.9
CsaV3_4G037400 Cucumis sativus L. HOM05D006218 ORTHO05D007338 3.5e-15 86.7 69 59.4
Cfa013418 Carpinus fangiana HOM05D000602 ORTHO05D007338 3.0e-14 83.6 56 60.7
HanXRQChr03g0064651 Helianthus annuus HOM05D006218 ORTHO05D007338 1.1e-13 81.6 45 84.4
FvH4_5g25520 Fragaria vesca HOM05D006218 ORTHO05D007338 3.3e-13 80.1 55 63.6
HPP92_001390 Vanilla planifolia HOM05D006218 ORTHO05D007338 2.8e-12 77.0 64 53.1
Haze_21910 Corylus avellana HOM05D000602 ORTHO05D002639 4.7e-12 76.3 50 68.0
Lsat_1_v5_gn_9_33960 Lactuca sativa HOM05D006218 ORTHO05D007338 4.7e-12 76.3 67 56.7
RcHm_v2.0_Chr7g0215901 Rosa chinensis HOM05D006218 ORTHO05D007338 2.0e-10 70.9 42 69.0
Dinv10687 Davidia involucrata HOM05D011850 ORTHO05D011180 2.6e-10 70.5 197 26.9
RcHm_v2.0_Chr7g0219831 Rosa chinensis HOM05D006218 ORTHO05D007338 2.6e-10 70.5 81 46.9
Hma1.2p1_0612F.1_g188870 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 2.2e-09 67.4 51 52.9
Sopen02g018380 Solanum pennellii HOM05D006218 ORTHO05D007338 2.9e-09 67.0 69 49.3
Cfa014110 Carpinus fangiana HOM05D006218 ORTHO05D007338 3.8e-09 66.6 39 69.2
FAN08G0845 Fragaria x ananassa HOM05D006218 ORTHO05D007338 4.2e-08 63.2 40 65.0
Actinidia04846 Actinidia chinensis HOM05D011850 ORTHO05D011180 2.3e-06 57.4 87 31.0
FAN08G1712 Fragaria x ananassa HOM05D006218 ORTHO05D007338 3.0e-06 57.0 38 60.5
Actinidia09246 Actinidia chinensis HOM05D011850 ORTHO05D011180 5.1e-06 56.2 89 30.3
arahy.Tifrunner.gnm1.ann1.9489MQ Arachis hypogaea HOM05D006218 ORTHO05D007338 6.6e-06 55.8 34 67.6
PGSC0003DMG400021154 Solanum tuberosum HOM05D006218 ORTHO05D007338 6.6e-06 55.8 98 38.8


User provided reference genes

Program Settings