Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.4e-287 992.3 503 100.0
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 4.1e-231 804.7 499 83.8
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.5e-209 733.0 506 77.9
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 7.3e-204 714.1 506 70.9
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 2.9e-200 702.2 435 79.3
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.1e-199 700.3 436 78.0
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 2.4e-199 699.1 468 75.9
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.5e-196 689.9 513 69.4
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.9e-196 689.5 499 71.5
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 7.3e-196 687.6 421 78.4
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 7.3e-196 687.6 421 78.4
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 7.3e-196 687.6 431 76.8
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 7.3e-196 687.6 427 78.5
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.2e-195 686.8 460 72.8
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.1e-195 686.0 429 75.8
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.1e-195 686.0 460 73.9
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.8e-195 685.6 430 77.7
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 4.7e-195 684.9 462 74.9
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.1e-194 683.7 489 70.3
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.4e-194 683.3 430 77.4
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.8e-194 682.9 486 71.4
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 4.0e-194 681.8 428 75.9
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 5.2e-194 681.4 425 76.5
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 8.9e-194 680.6 463 74.1
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.2e-193 680.2 457 73.3
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 5.8e-193 677.9 446 75.1
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 5.8e-193 677.9 454 72.7
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 9.9e-193 677.2 425 76.7
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.7e-192 676.4 457 72.9
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.7e-192 676.4 501 69.5
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 3.8e-192 675.2 447 74.5
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 8.4e-192 674.1 427 75.9
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.1e-191 673.7 421 76.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 4.2e-191 671.8 458 72.5
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 5.4e-191 671.4 455 72.7
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 5.4e-191 671.4 463 72.1
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-190 670.2 463 71.9
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.6e-190 669.8 548 64.4
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 2.1e-190 669.5 420 76.0
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 2.1e-190 669.5 448 73.0
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.7e-190 669.1 477 70.4
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 4.6e-190 668.3 454 72.9
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 7.8e-190 667.5 463 71.7
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 7.8e-190 667.5 427 75.4
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.3e-189 666.8 463 71.5
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 1.3e-189 666.8 462 71.2
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.7e-189 666.4 437 73.5
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.7e-189 666.4 457 72.9
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.7e-189 666.4 425 76.0
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.9e-189 665.2 485 68.5
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 5.1e-189 664.8 432 75.9
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.5e-188 663.3 452 72.1
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.5e-188 663.3 463 71.7
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 1.5e-188 663.3 430 74.7
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.5e-188 663.3 463 71.3
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.9e-188 662.9 420 76.2
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.9e-188 662.9 502 66.7
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 5.6e-188 661.4 422 75.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 7.3e-188 661.0 421 76.0
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.6e-187 658.7 463 70.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.1e-186 657.1 423 74.0
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.1e-186 657.1 501 69.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.1e-180 637.1 454 69.8
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.6e-177 625.9 382 79.1
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 2.6e-177 625.9 430 71.9
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 5.8e-177 624.8 377 80.6
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 7.6e-177 624.4 477 66.7
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 4.9e-176 621.7 382 78.0
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 2.4e-175 619.4 440 70.2
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.2e-175 618.6 384 77.6
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 5.5e-175 618.2 467 67.7
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.2e-174 617.1 384 78.1
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 2.1e-174 616.3 469 68.4
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 3.5e-174 615.5 378 78.3
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 7.4e-172 607.8 378 77.0
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 2.2e-168 596.3 430 70.9
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.3e-165 587.0 416 69.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.1e-162 575.9 449 65.3
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 6.9e-162 574.7 423 68.3
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 5.5e-159 565.1 336 80.4
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.3e-157 560.5 426 67.1
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 5.1e-157 558.5 399 69.7
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 1.9e-156 556.6 422 65.2
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.6e-155 553.5 436 65.1
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 6.5e-152 541.6 427 62.3
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 2.5e-151 539.7 428 61.2
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 4.2e-151 538.9 351 74.9
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 2.8e-147 526.2 464 59.9
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 2.6e-145 519.6 372 69.6
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 9.7e-140 501.1 313 77.6
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.2e-136 490.0 445 59.3
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.0e-117 427.9 442 51.6
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.4e-117 427.6 460 48.9
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 3.4e-108 396.4 261 70.9
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.6e-105 387.5 252 73.8
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 1.1e-98 364.8 433 47.6
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 3.0e-88 330.1 202 73.3
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 2.1e-86 323.9 285 56.1
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 2.2e-83 313.9 364 50.8
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 8.4e-83 312.0 364 50.8
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 2.8e-78 297.0 225 69.8
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 1.4e-69 268.1 210 64.3
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.0e-64 251.9 179 69.3
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.9e-59 233.8 445 38.2
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 4.2e-58 229.9 311 48.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 1.8e-53 214.5 164 65.2
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 7.7e-36 156.0 111 66.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.0e-35 155.6 93 79.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 2.4e-29 134.4 83 81.9
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 3.8e-27 127.1 89 69.7
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.0e-15 88.2 58 69.0
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.7e-09 67.8 42 78.6
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 5.7e-07 60.1 65 49.2


User provided reference genes

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