Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0478041 Helianthus annuus HOM05D000519 ORTHO05D000959 4.0e-69 264.6 130 100.0
HanXRQChr15g0478031 Helianthus annuus HOM05D000519 ORTHO05D000959 6.6e-24 114.4 131 49.6
HanXRQChr17g0544761 Helianthus annuus HOM05D000519 ORTHO05D000959 2.9e-19 99.0 127 48.8
HanXRQChr15g0478021 Helianthus annuus HOM05D000519 ORTHO05D000959 1.0e-16 90.5 132 43.2
ECA246G1681 Erigeron canadensis HOM05D000519 ORTHO05D000959 2.8e-14 82.4 128 43.8
Lsat_1_v5_gn_1_114580 Lactuca sativa HOM05D000519 ORTHO05D000959 7.6e-12 74.3 127 43.3
ECA248G0374 Erigeron canadensis HOM05D000519 ORTHO05D000959 6.4e-11 71.2 116 38.8
C01p26260 Brassica napus HOM05D000519 ORTHO05D000959 1.2e-09 67.0 88 42.0
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 1.2e-09 67.0 110 35.5
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 1.2e-09 67.0 110 35.5
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 1.6e-09 66.6 110 35.5
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 1.6e-09 66.6 110 35.5
BcaC02g10392 Brassica carinata HOM05D000519 ORTHO05D000959 2.7e-09 65.9 82 36.6
C04p29440 Brassica napus HOM05D000519 ORTHO05D000959 2.7e-09 65.9 82 36.6
HanXRQChr04g0096481 Helianthus annuus HOM05D000519 ORTHO05D000959 2.7e-09 65.9 119 35.3
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.5e-09 65.5 123 36.6
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.5e-09 65.5 123 36.6
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 3.5e-09 65.5 70 45.7
ECA246G3520 Erigeron canadensis HOM05D000519 ORTHO05D000959 3.5e-09 65.5 120 40.0
HanXRQChr04g0096491 Helianthus annuus HOM05D000519 ORTHO05D000959 3.5e-09 65.5 122 36.9
HanXRQChr04g0096501 Helianthus annuus HOM05D000519 ORTHO05D000959 3.5e-09 65.5 91 39.6
Lsat_1_v5_gn_1_114780 Lactuca sativa HOM05D000519 ORTHO05D000959 4.6e-09 65.1 117 37.6
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 6.0e-09 64.7 108 33.3
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 6.0e-09 64.7 120 36.7
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 6.0e-09 64.7 72 43.1
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 7.8e-09 64.3 110 34.5
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 1.0e-08 63.9 89 39.3
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 1.3e-08 63.5 86 43.0
HanXRQChr17g0544751 Helianthus annuus HOM05D000519 ORTHO05D000959 1.3e-08 63.5 131 35.1
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 1.7e-08 63.2 119 34.5
Thhalv10026611m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 1.7e-08 63.2 88 40.9
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 1.7e-08 63.2 72 41.7
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.7e-08 63.2 72 45.8
CDE07G0061 Ceratophyllum demersum HOM05D000919 ORTHO05D001187 3.0e-08 62.4 95 33.7
RcHm_v2.0_Chr3g0452681 Rosa chinensis HOM05D000519 ORTHO05D000959 3.0e-08 62.4 74 44.6
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 3.9e-08 62.0 86 39.5
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 3.9e-08 62.0 86 39.5
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 3.9e-08 62.0 70 42.9
Migut.M01409 Erythranthe guttata HOM05D000519 ORTHO05D000959 3.9e-08 62.0 101 40.6
Lsat_1_v5_gn_1_114540 Lactuca sativa HOM05D000519 ORTHO05D000959 3.9e-08 62.0 116 37.9
CAN.G1263.18 Capsicum annuum HOM05D000519 ORTHO05D000959 5.1e-08 61.6 61 45.9
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 5.1e-08 61.6 88 38.6
BcaB01g03103 Brassica carinata HOM05D000519 ORTHO05D000959 6.6e-08 61.2 84 35.7
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 6.6e-08 61.2 88 39.8
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 6.6e-08 61.2 75 44.0
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 6.6e-08 61.2 88 39.8
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 6.6e-08 61.2 75 44.0
CARHR173800 Cardamine hirsuta HOM05D000519 ORTHO05D000959 6.6e-08 61.2 89 34.8
BcaNung00187 Brassica carinata HOM05D000519 ORTHO05D000959 8.7e-08 60.8 70 42.9
HanXRQChr04g0096521 Helianthus annuus HOM05D000519 ORTHO05D000959 8.7e-08 60.8 91 38.5
GSVIVG01003320001 Vitis vinifera HOM05D000519 ORTHO05D000959 8.7e-08 60.8 80 41.2
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 1.1e-07 60.5 89 33.7
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 1.5e-07 60.1 93 35.5
AL8G10420 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.5e-07 60.1 89 33.7
Psat1g175600 Pisum sativum HOM05D000519 ORTHO05D000959 1.5e-07 60.1 115 32.2
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 1.5e-07 60.1 114 33.3
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 1.5e-07 60.1 113 27.4
HanXRQChr04g0096511 Helianthus annuus HOM05D000519 ORTHO05D000959 2.5e-07 59.3 115 33.0
Peaxi162Scf00924g00021 Petunia axillaris HOM05D000519 ORTHO05D000959 2.5e-07 59.3 92 38.0
Sed0023459 Sechium edule HOM05D000519 ORTHO05D000959 2.5e-07 59.3 80 35.0
Migut.M01410 Erythranthe guttata HOM05D000519 ORTHO05D000959 3.3e-07 58.9 95 38.9
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 3.3e-07 58.9 93 35.5
HPP92_014276 Vanilla planifolia HOM05D000519 ORTHO05D000959 3.3e-07 58.9 124 37.1
Duzib160G0143 Durio zibethinus HOM05D000519 ORTHO05D000959 4.3e-07 58.5 120 30.8
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 4.3e-07 58.5 119 33.6
Phvul.003G084300 Phaseolus vulgaris HOM05D000519 ORTHO05D000959 4.3e-07 58.5 108 35.2
RcHm_v2.0_Chr5g0010271 Rosa chinensis HOM05D000519 ORTHO05D000959 4.3e-07 58.5 77 39.0
CAN.G1529.1 Capsicum annuum HOM05D000519 ORTHO05D000959 5.6e-07 58.2 61 44.3
Ca_00730_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 5.6e-07 58.2 114 31.6
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 5.6e-07 58.2 79 41.8
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 7.3e-07 57.8 106 35.8
ClCG09G021860 Citrullus lanatus HOM05D000519 ORTHO05D000959 7.3e-07 57.8 73 38.4
QL05p069227 Quercus lobata HOM05D000519 ORTHO05D000959 7.3e-07 57.8 94 34.0
HPP92_006095 Vanilla planifolia HOM05D000519 ORTHO05D000959 7.3e-07 57.8 78 39.7
Aqoxy1G04041 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 9.6e-07 57.4 95 37.9
Aqoxy2G02691 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 9.6e-07 57.4 113 31.0
PGSC0003DMG400047215 Solanum tuberosum HOM05D000519 ORTHO05D000959 9.6e-07 57.4 108 41.7
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 9.6e-07 57.4 114 36.0
AL4G28250 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.3e-06 57.0 112 30.4
Carub.0004s1417 Capsella rubella HOM05D000519 ORTHO05D000959 1.3e-06 57.0 89 33.7
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 1.3e-06 57.0 70 42.9
ECA248G1813 Erigeron canadensis HOM05D000519 ORTHO05D000959 1.3e-06 57.0 118 34.7
Migut.M01408 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.3e-06 57.0 82 36.6
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.3e-06 57.0 88 37.5
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 1.3e-06 57.0 101 37.6
BcaNung00188 Brassica carinata HOM05D000519 ORTHO05D000959 1.6e-06 56.6 89 36.0
CARHR126700 Cardamine hirsuta HOM05D000519 ORTHO05D000959 1.6e-06 56.6 87 31.0
Cfa019521 Carpinus fangiana HOM05D000519 ORTHO05D000959 1.6e-06 56.6 88 37.5
Migut.O00215 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.6e-06 56.6 87 41.4
Thhalv10017424m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 1.6e-06 56.6 85 31.8
Psat2g010240 Pisum sativum HOM05D000519 ORTHO05D000959 1.6e-06 56.6 111 27.9
Rhsim02G0101200 Rhododendron simsii HOM05D000519 ORTHO05D000959 1.6e-06 56.6 69 40.6
A09p23090 Brassica napus HOM05D000519 ORTHO05D000959 2.1e-06 56.2 92 35.9
BraA09t37913Z Brassica rapa HOM05D000519 ORTHO05D000959 2.1e-06 56.2 92 35.9
Manes.03G153900 Manihot esculenta HOM05D000519 ORTHO05D000959 2.1e-06 56.2 88 35.2
Solyc04g014780.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 2.1e-06 56.2 106 41.5
A01p20930 Brassica napus HOM05D000519 ORTHO05D000959 2.8e-06 55.8 84 39.3
BraA01t02011Z Brassica rapa HOM05D000519 ORTHO05D000959 2.8e-06 55.8 84 39.3
Rhsim13G0144500 Rhododendron simsii HOM05D000519 ORTHO05D000959 2.8e-06 55.8 89 38.2
PGSC0003DMG400041780 Solanum tuberosum HOM05D000519 ORTHO05D000959 2.8e-06 55.8 73 45.2
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 3.6e-06 55.5 103 32.0
Haze_09252 Corylus avellana HOM05D000519 ORTHO05D000959 3.6e-06 55.5 88 37.5
Psat7g244200 Pisum sativum HOM05D000519 ORTHO05D000959 3.6e-06 55.5 114 34.2
BcaC04g21616 Brassica carinata HOM05D000519 ORTHO05D000959 4.8e-06 55.1 92 35.9
C09p29840 Brassica napus HOM05D000519 ORTHO05D000959 4.8e-06 55.1 92 35.9
C09p31850 Brassica napus HOM05D000519 ORTHO05D000959 4.8e-06 55.1 102 32.4
BolC9t55847H Brassica oleracea HOM05D000519 ORTHO05D000959 4.8e-06 55.1 92 35.9
CAN.G370.1 Capsicum annuum HOM05D000519 ORTHO05D000959 4.8e-06 55.1 109 33.0
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 4.8e-06 55.1 106 32.1
Nn3g21163 Nelumbo nucifera HOM05D000519 ORTHO05D000959 4.8e-06 55.1 69 37.7
Sed0013622 Sechium edule HOM05D000519 ORTHO05D000959 4.8e-06 55.1 73 41.1
A01p20960 Brassica napus HOM05D000519 ORTHO05D000959 6.2e-06 54.7 70 40.0
C01p26280 Brassica napus HOM05D020523 ORTHO05D000959 6.2e-06 54.7 96 33.3
BolC1t02574H Brassica oleracea HOM05D020523 ORTHO05D000959 6.2e-06 54.7 96 33.3
BraA01t02013Z Brassica rapa HOM05D000519 ORTHO05D000959 6.2e-06 54.7 70 40.0
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 6.2e-06 54.7 115 35.7
Manes.08G041000 Manihot esculenta HOM05D000519 ORTHO05D000959 6.2e-06 54.7 108 31.5
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 6.2e-06 54.7 121 34.7
TPR.G30458 Trifolium pratense HOM05D000519 ORTHO05D000959 6.2e-06 54.7 88 35.2
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 6.2e-06 54.7 88 37.5
HPP92_024483 Vanilla planifolia HOM05D000519 ORTHO05D000959 6.2e-06 54.7 88 37.5
BcaC09g50358 Brassica carinata HOM05D020523 ORTHO05D000959 8.1e-06 54.3 85 34.1
DCAR_004907 Daucus carota HOM05D000519 ORTHO05D000959 8.1e-06 54.3 106 32.1
Gohir.A06G154000 Gossypium hirsutum HOM05D000519 ORTHO05D000959 8.1e-06 54.3 108 32.4
Gorai.010G187500 Gossypium raimondii HOM05D000519 ORTHO05D000959 8.1e-06 54.3 106 32.1
RcHm_v2.0_Chr2g0140821 Rosa chinensis HOM05D000519 ORTHO05D000959 8.1e-06 54.3 84 33.3
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 8.1e-06 54.3 123 32.5


User provided reference genes

Program Settings