Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.5e-142 509.6 269 100.0
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 1.1e-70 270.8 228 64.5
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 3.4e-67 259.2 222 65.3
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 4.1e-60 235.7 218 66.1
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.1e-56 223.4 221 57.0
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.0e-55 221.1 222 55.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.0e-54 216.9 223 54.7
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 2.6e-54 216.5 219 56.2
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 5.7e-54 215.3 220 55.0
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 5.7e-54 215.3 216 55.6
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.7e-53 213.8 224 54.9
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 2.8e-53 213.0 217 54.4
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 6.3e-53 211.8 224 53.6
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.8e-52 210.3 220 53.2
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.1e-52 209.5 222 54.1
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 3.1e-52 209.5 219 53.0
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 4.1e-52 209.1 238 51.7
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 5.3e-52 208.8 224 54.9
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.6e-51 207.2 224 54.0
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 4.5e-51 205.7 227 52.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 4.5e-51 205.7 220 52.7
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.3e-50 204.1 223 51.1
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.3e-50 204.1 218 52.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.7e-50 203.8 216 53.7
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 2.2e-50 203.4 227 53.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 2.9e-50 203.0 221 49.8
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.1e-49 201.1 220 52.7
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.9e-49 200.3 216 54.2
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 2.1e-48 196.8 223 49.8
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 2.1e-48 196.8 224 52.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 2.7e-48 196.4 223 51.6
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 2.7e-48 196.4 220 49.1
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.6e-48 196.1 217 53.0
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.6e-48 196.1 218 53.7
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.0e-47 194.5 224 51.3
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.3e-46 189.5 220 51.8
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.3e-46 189.5 222 50.9
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.3e-46 189.5 222 51.8
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 4.4e-46 189.1 216 49.5
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 5.7e-46 188.7 216 50.0
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.7e-46 188.7 222 50.5
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.7e-46 188.7 223 51.1
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 9.7e-46 188.0 216 53.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-45 187.2 221 49.8
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.8e-45 186.4 220 51.4
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.7e-45 186.0 225 50.7
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 4.8e-45 185.7 219 53.0
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 8.2e-45 184.9 216 52.3
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 8.2e-45 184.9 217 50.7
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.1e-44 184.5 212 50.0
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 1.4e-44 184.1 221 48.4
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 9.1e-44 181.4 223 49.8
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 9.1e-44 181.4 229 47.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.2e-43 181.0 220 45.5
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 1.6e-43 180.6 221 50.7
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.7e-43 179.9 216 50.0
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 2.7e-43 179.9 216 50.0
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.7e-43 179.9 217 49.8
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 3.5e-43 179.5 176 56.8
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 5.9e-43 178.7 222 52.3
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.3e-42 177.6 221 46.6
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.3e-42 177.6 216 49.5
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 2.9e-42 176.4 221 46.6
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 8.5e-42 174.9 222 48.6
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.1e-41 174.5 222 45.5
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.5e-41 174.1 229 49.3
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.5e-41 174.1 227 48.0
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.9e-41 173.7 221 46.2
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 4.2e-41 172.6 154 61.0
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 5.5e-41 172.2 229 46.3
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 9.4e-41 171.4 215 45.6
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.6e-40 170.6 225 47.6
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 4.7e-40 169.1 218 51.8
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 8.0e-40 168.3 225 46.2
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.0e-39 167.9 229 48.0
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.3e-39 166.8 226 46.9
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 3.0e-39 166.4 231 45.5
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 5.2e-39 165.6 267 40.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.6e-38 163.3 218 45.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.7e-38 162.2 225 44.4
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 7.5e-38 161.8 218 47.7
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 9.8e-38 161.4 224 50.4
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.3e-37 161.0 221 50.2
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.7e-37 160.6 225 48.4
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 3.7e-37 159.5 125 65.6
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 3.7e-37 159.5 228 46.5
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 4.8e-37 159.1 220 45.5
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.4e-36 157.5 223 49.8
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.4e-36 156.8 224 43.3
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 9.1e-36 154.8 124 64.5
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.6e-35 154.1 126 62.7
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.7e-34 150.6 188 50.5
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.2e-32 144.4 220 43.2
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.0e-31 141.4 227 42.3
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.0e-31 141.4 218 47.2
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.0e-31 139.4 227 41.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 6.8e-31 138.7 169 49.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.5e-30 137.5 227 40.5
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.0e-30 137.1 219 42.9
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 3.4e-30 136.3 271 39.1
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.2e-27 127.9 219 37.9
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 2.0e-27 127.1 191 45.0
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.7e-27 126.7 128 54.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 7.8e-27 125.2 227 35.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 5.0e-26 122.5 126 53.2
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 6.6e-26 122.1 230 37.4
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.6e-24 117.5 323 32.8
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 7.0e-20 102.1 242 31.8
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 7.0e-20 102.1 234 31.6
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 2.0e-19 100.5 225 36.9
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 3.1e-15 86.7 53 75.5
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 6.0e-11 72.4 97 40.2
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 4.7e-08 62.8 49 61.2
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 8.1e-08 62.0 93 46.2
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 8.1e-08 62.0 104 36.5
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 1.1e-07 61.6 93 46.2
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 1.8e-07 60.8 74 45.9
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 3.4e-06 56.6 113 31.0


User provided reference genes

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