Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0477781 Helianthus annuus HOM05D002799 ORTHO05D007076 5.5e-46 187.2 89 100.0
HanXRQChr04g0105251 Helianthus annuus HOM05D002799 ORTHO05D007076 1.1e-35 152.9 99 80.8
ECA233G3743 Erigeron canadensis HOM05D002799 ORTHO05D007076 8.0e-29 130.2 98 69.4
Atru.chr12.2008 Acer truncatum HOM05D002799 ORTHO05D007076 1.3e-26 122.9 98 65.3
RcHm_v2.0_Chr1g0383851 Rosa chinensis HOM05D002799 ORTHO05D007076 3.7e-26 121.3 98 62.2
FvH4_7g33590 Fragaria vesca HOM05D002799 ORTHO05D007076 4.8e-26 120.9 98 62.2
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.8e-26 120.9 98 62.2
CSS0010295 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D007076 8.3e-26 120.2 98 64.3
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-25 119.8 98 61.2
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-25 119.8 98 61.2
FAN10G3482 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-25 119.8 98 61.2
Ciclev10001355m.g Citrus clementina HOM05D002799 ORTHO05D007076 1.4e-25 119.4 98 65.3
THA.LOC104815357 Tarenaya hassleriana HOM05D002799 ORTHO05D007076 2.4e-25 118.6 98 63.3
PSO782G0547 Papaver somniferum HOM05D002799 ORTHO05D007076 3.1e-25 118.2 98 61.2
FvH4_7g33592 Fragaria vesca HOM05D002799 ORTHO05D007076 4.1e-25 117.9 98 60.2
PSO063G7569 Papaver somniferum HOM05D002799 ORTHO05D007076 4.1e-25 117.9 98 61.2
Hund09770 Selenicereus undatus HOM05D002799 ORTHO05D007076 4.1e-25 117.9 98 60.2
CiPaw.05G237100 Carya illinoinensis HOM05D002799 ORTHO05D007076 5.3e-25 117.5 98 61.2
Actinidia08737 Actinidia chinensis HOM05D002799 ORTHO05D007076 7.0e-25 117.1 98 61.2
Eucgr.K00095 Eucalyptus grandis HOM05D002799 ORTHO05D007076 9.1e-25 116.7 98 63.3
Lj1C1032G6 Lonicera japonica HOM05D002799 ORTHO05D007076 9.1e-25 116.7 98 61.2
MD07G1305800 Malus domestica HOM05D002799 ORTHO05D007076 9.1e-25 116.7 98 60.2
Lalb_Chr03g0024441 Lupinus albus HOM05D002799 ORTHO05D007076 1.2e-24 116.3 98 60.2
GSVIVG01024449001 Vitis vinifera HOM05D002799 ORTHO05D007076 1.2e-24 116.3 97 61.9
CANSAT21G1863 Cannabis sativa HOM05D002799 ORTHO05D007076 1.6e-24 115.9 98 59.2
Lj3g0008833 Lotus japonicus HOM05D002799 ORTHO05D007076 1.6e-24 115.9 98 61.2
MD01G1233700 Malus domestica HOM05D002799 ORTHO05D007076 1.6e-24 115.9 98 60.2
Thecc.08G172500 Theobroma cacao HOM05D002799 ORTHO05D007076 1.6e-24 115.9 98 63.3
PGR004G1694 Punica granatum HOM05D002799 ORTHO05D007076 2.0e-24 115.5 98 59.2
Prupe.2G323900 Prunus persica HOM05D002799 ORTHO05D007076 2.7e-24 115.2 98 62.2
QL09p025824 Quercus lobata HOM05D002799 ORTHO05D007076 2.7e-24 115.2 98 61.2
CsaV3_4G004510 Cucumis sativus L. HOM05D002799 ORTHO05D007076 3.5e-24 114.8 98 62.2
Hma1.2p1_0758F.1_g213600 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 3.5e-24 114.8 98 58.2
Duzib211G0014 Durio zibethinus HOM05D002799 ORTHO05D007076 4.5e-24 114.4 100 61.0
Oeu014983.2 Olea europaea HOM05D002799 ORTHO05D007076 4.5e-24 114.4 98 60.2
Nn1g02009 Nelumbo nucifera HOM05D002799 ORTHO05D007076 5.9e-24 114.0 98 59.2
COL.COLO4_24619 Corchorus olitorius HOM05D002799 ORTHO05D007076 7.7e-24 113.6 98 60.2
Glyma.12G019100 Glycine max HOM05D002799 ORTHO05D007076 7.7e-24 113.6 98 60.2
Sed0006194 Sechium edule HOM05D002799 ORTHO05D007076 7.7e-24 113.6 98 62.2
Dinv17267 Davidia involucrata HOM05D002799 ORTHO05D007076 1.0e-23 113.2 99 61.6
Manes.08G164400 Manihot esculenta HOM05D002799 ORTHO05D007076 1.3e-23 112.8 98 61.2
Sabra15G0103800 Salix brachista HOM05D002799 ORTHO05D007076 1.3e-23 112.8 97 61.9
ATR0829G228 Amborella trichopoda HOM05D002799 ORTHO05D007076 1.7e-23 112.5 98 59.2
PGSC0003DMG400012810 Solanum tuberosum HOM05D002799 ORTHO05D007076 1.7e-23 112.5 99 60.6
Sopen03g002460 Solanum pennellii HOM05D002799 ORTHO05D007076 2.2e-23 112.1 98 60.2
TAR374G0973 Trochodendron aralioides HOM05D002799 ORTHO05D007076 2.2e-23 112.1 98 57.1
AT2G04940 Arabidopsis thaliana HOM05D002799 ORTHO05D007076 2.9e-23 111.7 100 62.0
arahy.Tifrunner.gnm1.ann1.IZ2599 Arachis hypogaea HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 61.2
arahy.Tifrunner.gnm1.ann1.ZMX436 Arachis hypogaea HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 61.2
MSTRG.11401 Avicennia marina HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 61.2
SalBow5G5430 Salvia bowleyana HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 60.2
Solyc03g006452.1 Solanum lycopersicum HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 60.2
Solyc03g006460.4 Solanum lycopersicum HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 60.2
VMungo1127G2112 Vigna mungo HOM05D002799 ORTHO05D007076 2.9e-23 111.7 98 59.2
MBI04_g21139_MAGBIO Magnolia biondii HOM05D002799 ORTHO05D007076 3.8e-23 111.3 98 59.2
vmacro06500 Vaccinium macrocarpon HOM05D002799 ORTHO05D007076 3.8e-23 111.3 97 62.9
DCAR_009002 Daucus carota HOM05D002799 ORTHO05D007076 5.0e-23 110.9 100 60.0
Gohir.D09G053900 Gossypium hirsutum HOM05D002799 ORTHO05D007076 5.0e-23 110.9 98 58.2
Gorai.006G053300 Gossypium raimondii HOM05D002799 ORTHO05D007076 5.0e-23 110.9 98 58.2
Phvul.011G021500 Phaseolus vulgaris HOM05D002799 ORTHO05D007076 5.0e-23 110.9 98 59.2
Potri.015G079500 Populus trichocarpa HOM05D002799 ORTHO05D007076 5.0e-23 110.9 98 60.2
unitig_62.g23564 Utricularia gibba HOM05D002799 ORTHO05D007076 5.0e-23 110.9 98 60.2
AL3G42700 Arabidopsis lyrata HOM05D002799 ORTHO05D007076 6.5e-23 110.5 98 59.2
Cc03_g15080 Coffea canephora HOM05D002799 ORTHO05D007076 6.5e-23 110.5 97 61.9
Peaxi162Scf00195g01110 Petunia axillaris HOM05D002799 ORTHO05D007076 6.5e-23 110.5 99 60.6
Cpa.g.sc67.53 Carica papaya HOM05D002799 ORTHO05D007076 1.1e-22 109.8 97 60.8
Migut.I00118 Erythranthe guttata HOM05D002799 ORTHO05D007076 1.1e-22 109.8 98 59.2
Medtr4g077510 Medicago truncatula HOM05D002799 ORTHO05D007076 1.1e-22 109.8 98 58.2
A03p44540 Brassica napus HOM05D002799 ORTHO05D007076 1.5e-22 109.4 99 62.6
BraA03t13587Z Brassica rapa HOM05D002799 ORTHO05D007076 1.5e-22 109.4 99 62.6
Carub.0003s2662 Capsella rubella HOM05D002799 ORTHO05D007076 1.5e-22 109.4 100 60.0
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.9e-22 109.0 98 61.2
Sp3g23560 Schrenkiella parvula HOM05D002799 ORTHO05D007076 1.9e-22 109.0 98 60.2
BcaC01g03181 Brassica carinata HOM05D002799 ORTHO05D007076 3.2e-22 108.2 99 61.6
C03p55340 Brassica napus HOM05D002799 ORTHO05D007076 3.2e-22 108.2 99 61.6
BolC3t17806H Brassica oleracea HOM05D002799 ORTHO05D007076 3.2e-22 108.2 99 61.6
Ca_04931_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 3.2e-22 108.2 99 58.6
Gohir.A09G055000 Gossypium hirsutum HOM05D002799 ORTHO05D007076 3.2e-22 108.2 98 57.1
BcaB08g34494 Brassica carinata HOM05D002799 ORTHO05D007076 4.2e-22 107.8 99 61.6
Ca_29855_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 4.2e-22 107.8 98 58.2
TWI34G0554 Tripterygium wilfordii HOM05D002799 ORTHO05D007076 4.2e-22 107.8 98 60.2
Lsat_1_v5_gn_8_3761 Lactuca sativa HOM05D002799 ORTHO05D007076 1.6e-21 105.9 120 53.3
Aqoxy3G02040 Aquilegia oxysepala HOM05D002799 ORTHO05D007076 2.7e-21 105.1 98 54.1
CAN.G289.47 Capsicum annuum HOM05D002799 ORTHO05D007076 2.7e-21 105.1 98 58.2
AUR62028151 Chenopodium quinoa HOM05D002799 ORTHO05D007076 2.7e-21 105.1 99 57.6
EL10Ac3g05098 Beta vulgaris HOM05D002799 ORTHO05D007076 3.6e-21 104.8 97 56.7
AUR62005914 Chenopodium quinoa HOM05D002799 ORTHO05D007076 4.7e-21 104.4 99 57.6
Thhalv10002559m.g Eutrema salsugineum HOM05D002799 ORTHO05D007076 6.1e-21 104.0 99 58.6
Ah.13g072670 Amaranthus hybridus HOM05D002799 ORTHO05D007076 1.8e-20 102.4 95 54.7
CARHR102970 Cardamine hirsuta HOM05D002799 ORTHO05D007076 1.8e-20 102.4 99 59.6
HPP92_015127 Vanilla planifolia HOM05D002799 ORTHO05D007076 1.8e-20 102.4 99 58.6
Aa31LG3G2760 Aethionema arabicum HOM05D002799 ORTHO05D007076 3.0e-20 101.7 97 57.7
MELO3C017614.2 Cucumis melo HOM05D002799 ORTHO05D007076 4.0e-20 101.3 128 46.1
Os02g0238500 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 4.8e-18 94.4 99 51.5
Os04g0599400 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 4.1e-17 91.3 98 49.0
SMO196G0267 Selaginella moellendorffii HOM05D002799 ORTHO05D007076 4.1e-17 91.3 98 50.0
Zm00001eb430250 Zea mays HOM05D002799 ORTHO05D007076 9.1e-17 90.1 98 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1885 Anthoceros agrestis HOM05D002799 ORTHO05D007076 1.6e-16 89.4 124 43.5
Actinidia34299 Actinidia chinensis HOM05D002799 ORTHO05D007076 1.0e-15 86.7 96 53.1
TPR.G21490 Trifolium pratense HOM05D002799 ORTHO05D007076 1.3e-15 86.3 67 64.2
Cfa015896 Carpinus fangiana HOM05D002799 ORTHO05D007076 2.3e-15 85.5 63 69.8
Nitab4.5_0000793g0030 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.3e-15 85.5 64 70.3
Lj2C621T3 Lonicera japonica HOM05D002799 ORTHO05D007076 6.6e-15 84.0 64 64.1
Lj3A801T16 Lonicera japonica HOM05D002799 ORTHO05D007076 6.6e-15 84.0 101 46.5
Psat7g171360 Pisum sativum HOM05D002799 ORTHO05D007076 6.6e-15 84.0 64 64.1
ClCG07G017310 Citrullus lanatus HOM05D002799 ORTHO05D007076 8.6e-15 83.6 64 65.6
Haze_00593 Corylus avellana HOM05D002799 ORTHO05D007076 8.6e-15 83.6 62 69.4
Mapoly0041s0072 Marchantia polymorpha HOM05D002799 ORTHO05D007076 8.6e-15 83.6 127 42.5
Pp3c5_23880 Physcomitrium patens HOM05D002799 ORTHO05D007076 2.1e-13 79.0 125 40.0
Pp3c3_18900 Physcomitrium patens HOM05D002799 ORTHO05D007076 3.6e-13 78.2 126 38.9
SEGI_38885 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 1.8e-12 75.9 65 60.0
CBR_g26239 Chara braunii HOM05D002799 ORTHO05D007076 3.4e-11 71.6 145 33.1
Nitab4.5_0000701g0060 Nicotiana tabacum HOM05D002799 ORTHO05D007076 4.1e-09 64.7 37 81.1
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 1.3e-07 59.7 37 75.7


User provided reference genes

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