Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 1.1e-277 959.5 531 100.0
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 4.1e-104 382.9 391 57.5
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 2.0e-90 337.4 389 52.2
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 5.2e-83 312.8 392 49.2
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 2.2e-65 254.2 352 44.3
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 9.2e-64 248.8 350 45.4
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 9.2e-64 248.8 352 43.8
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 2.7e-63 247.3 350 44.9
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 7.8e-63 245.7 356 41.9
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 7.8e-63 245.7 350 45.1
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 1.3e-62 245.0 350 44.3
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 1.3e-62 245.0 345 42.3
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 3.0e-62 243.8 360 43.9
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 3.9e-62 243.4 343 43.1
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.1e-61 241.9 351 41.3
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 1.9e-61 241.1 354 40.4
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 2.5e-61 240.7 356 41.9
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 4.3e-61 240.0 353 44.2
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 4.3e-61 240.0 356 43.3
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.2e-60 238.4 352 41.2
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.6e-60 238.0 353 41.9
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 6.2e-60 236.1 344 42.2
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 8.0e-60 235.7 350 42.3
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.0e-59 235.3 356 40.4
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 1.8e-59 234.6 353 42.8
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.8e-59 234.6 350 40.6
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 3.1e-59 233.8 349 41.0
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 5.2e-59 233.0 351 41.3
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 6.8e-59 232.6 349 40.7
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 8.9e-59 232.3 352 41.8
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.2e-58 231.9 349 41.5
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.5e-58 231.5 351 43.3
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 3.4e-58 230.3 350 40.9
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 3.4e-58 230.3 342 41.8
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 4.4e-58 229.9 340 41.8
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 4.4e-58 229.9 340 42.1
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 4.4e-58 229.9 354 41.0
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 5.8e-58 229.6 351 40.2
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 5.8e-58 229.6 351 40.5
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 5.8e-58 229.6 343 40.8
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 7.5e-58 229.2 358 41.1
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 7.5e-58 229.2 351 41.0
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 7.5e-58 229.2 356 41.6
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 7.5e-58 229.2 350 40.6
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 1.3e-57 228.4 337 41.8
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 1.3e-57 228.4 354 40.7
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.2e-57 227.6 345 39.4
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.9e-57 227.3 351 41.6
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.9e-57 227.3 345 38.8
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 2.9e-57 227.3 353 41.9
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 2.9e-57 227.3 345 38.8
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 6.4e-57 226.1 354 39.0
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 8.3e-57 225.7 345 38.8
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.3e-57 225.7 345 39.1
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.1e-56 225.3 345 38.8
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.1e-56 225.3 345 38.8
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 4.1e-56 223.4 345 40.9
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 7.0e-56 222.6 344 40.7
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.6e-55 221.5 349 40.1
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.6e-55 221.5 343 38.2
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 2.3e-54 217.6 340 37.9
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 2.3e-54 217.6 351 39.6
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 3.0e-54 217.2 351 39.9
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 3.9e-54 216.9 394 36.8
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.5e-53 214.9 346 39.9
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 3.3e-53 213.8 397 37.8
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 1.2e-52 211.8 344 39.0
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 1.6e-52 211.5 310 43.5
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 4.7e-52 209.9 416 36.3
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 8.1e-52 209.1 345 37.7
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.1e-51 208.8 368 39.1
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.4e-51 208.4 329 39.8
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.4e-51 208.4 360 36.9
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 4.0e-51 206.8 354 39.3
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 8.9e-51 205.7 351 37.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.2e-49 201.1 350 38.0
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 4.9e-49 199.9 352 38.1
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.4e-48 198.4 351 37.9
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.9e-48 198.0 344 37.8
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 4.1e-48 196.8 350 37.7
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 5.4e-48 196.4 342 37.7
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 7.1e-48 196.1 348 36.5
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.2e-47 195.3 345 36.5
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.6e-47 194.9 349 36.1
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.7e-47 194.1 321 40.2
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 2.7e-47 194.1 344 36.9
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.6e-47 193.4 340 36.8
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 1.3e-46 191.8 350 36.9
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 3.0e-46 190.7 345 36.8
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 8.6e-46 189.1 294 42.9
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.9e-45 188.0 342 35.7
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 2.5e-45 187.6 335 35.2
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 4.3e-45 186.8 360 36.4
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 9.5e-45 185.7 338 34.9
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.6e-44 184.9 338 35.5
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.8e-44 184.1 350 35.1
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 8.1e-44 182.6 343 35.0
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.8e-43 181.4 354 35.3
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 3.1e-43 180.6 333 34.8
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 5.2e-43 179.9 304 39.8
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 3.4e-42 177.2 348 35.3
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 5.8e-42 176.4 348 33.6
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 6.4e-41 172.9 297 36.4
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 6.4e-41 172.9 348 34.8
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 6.4e-41 172.9 296 36.8
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 1.4e-40 171.8 338 35.2
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 3.2e-40 170.6 386 28.8
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 3.5e-39 167.2 303 35.6
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.3e-38 165.2 336 31.8
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 2.3e-38 164.5 292 38.0
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 5.1e-38 163.3 343 32.1
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 1.1e-37 162.2 371 31.3
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 2.8e-36 157.5 271 40.2
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.7e-36 156.8 348 30.2
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 6.2e-36 156.4 288 37.5
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.7e-33 148.3 335 32.2
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 2.1e-31 141.4 335 32.5
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 1.1e-29 135.6 224 38.8
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 2.1e-28 131.3 230 37.4
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 8.1e-28 129.4 216 40.3
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.0e-26 124.8 256 33.6
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 1.1e-24 119.0 207 37.2
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 5.4e-24 116.7 223 35.0
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 7.4e-21 106.3 286 28.0
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.6e-20 105.1 232 37.1
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 4.5e-18 97.1 133 40.6
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.3e-17 95.5 227 32.6
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 1.1e-16 92.4 130 43.1
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.8e-14 85.1 350 26.3
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 4.8e-12 77.0 205 25.9
HanXRQChr16g0524281 Helianthus annuus HOM05D005473 ORTHO05D006543 1.4e-11 75.5 42 83.3
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 2.6e-10 71.2 161 29.2
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 8.4e-09 66.2 166 28.9
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 3.2e-08 64.3 152 37.5


User provided reference genes

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