Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.7e-293 1010.7 487 100.0
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 4.4e-206 721.5 486 74.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 2.4e-180 636.0 370 82.2
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 9.3e-164 580.9 497 60.2
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.5e-161 573.5 494 59.5
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-161 573.5 489 59.7
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 4.8e-160 568.5 480 61.0
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 5.5e-156 555.1 481 58.0
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.0e-154 550.8 461 60.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.3e-154 549.7 487 57.1
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 2.3e-154 549.7 445 61.3
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.0e-154 549.3 403 67.0
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 3.0e-154 549.3 450 58.9
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.3e-153 545.8 449 60.6
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 9.7e-153 544.3 431 63.1
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.8e-152 542.7 476 60.7
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.8e-152 542.7 488 56.8
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 3.7e-152 542.3 492 57.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 8.2e-152 541.2 451 61.2
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.1e-151 540.8 388 65.5
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.1e-151 540.8 500 56.4
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.2e-150 537.3 432 61.1
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.5e-150 537.0 497 57.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 4.5e-150 535.4 469 59.9
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.3e-149 533.9 493 55.6
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.2e-148 529.3 373 66.0
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 9.4e-148 527.7 489 56.4
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.2e-147 527.3 460 58.5
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.6e-147 526.9 450 58.9
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.7e-147 526.2 489 55.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.7e-147 526.2 493 56.6
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 2.7e-147 526.2 439 59.5
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.9e-147 524.6 488 55.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 1.0e-146 524.2 488 57.2
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.8e-146 523.5 497 55.1
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.8e-146 523.5 489 57.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.0e-145 520.0 483 55.7
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.0e-145 520.0 495 54.3
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.6e-145 519.6 453 57.4
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 9.7e-145 517.7 493 55.8
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.2e-144 516.5 464 58.0
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.8e-144 515.4 488 56.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 8.2e-144 514.6 375 67.2
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 8.2e-144 514.6 440 59.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.1e-143 512.3 485 56.5
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 7.0e-143 511.5 500 54.2
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.5e-142 509.2 432 57.2
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.0e-141 507.7 459 56.9
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.7e-141 506.9 446 56.1
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.5e-141 504.6 429 58.0
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.5e-141 504.6 429 58.0
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 5.5e-140 501.9 455 58.5
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.1e-139 500.0 489 54.6
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.5e-137 493.8 453 57.4
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.0e-137 493.4 434 56.7
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.3e-137 492.7 464 54.7
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.8e-136 489.6 495 53.5
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 3.7e-136 489.2 472 54.2
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 4.8e-136 488.8 454 57.7
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.1e-135 487.6 452 57.3
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.1e-135 486.1 432 57.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.3e-133 480.7 464 56.0
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.7e-133 480.3 488 52.9
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.2e-133 479.9 433 57.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 8.5e-133 478.0 387 58.9
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.9e-132 476.9 433 56.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 2.5e-132 476.5 387 58.7
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 2.5e-132 476.5 380 59.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.5e-132 476.5 436 54.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.7e-131 473.0 496 51.8
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 8.0e-131 471.5 374 60.4
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.0e-130 471.1 398 57.3
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.3e-130 469.9 424 57.8
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 5.2e-130 468.8 458 53.3
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 6.8e-130 468.4 435 56.8
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 6.8e-130 468.4 430 55.8
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.5e-129 467.2 371 59.3
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.5e-129 467.2 371 59.3
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.5e-129 467.2 371 59.3
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 2.0e-129 466.8 434 57.1
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.4e-129 465.7 421 56.8
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 5.7e-129 465.3 475 50.9
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.3e-128 464.2 498 49.6
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 8.3e-128 461.5 422 56.2
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.4e-127 460.7 422 56.4
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.6e-126 457.2 422 56.2
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 3.5e-126 456.1 401 57.9
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 7.7e-126 454.9 509 50.9
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.7e-126 454.9 424 55.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-125 454.1 440 53.6
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-124 450.7 395 57.0
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 2.5e-124 449.9 439 52.4
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.5e-124 449.9 440 52.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.1e-123 446.8 485 50.3
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.6e-121 439.9 391 54.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.2e-118 431.0 465 49.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.4e-114 417.5 484 47.9
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.4e-111 406.8 431 50.3
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.9e-106 388.3 419 45.8
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 6.2e-91 339.0 327 56.0
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-85 321.6 480 42.5
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 3.4e-81 306.6 359 45.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.7e-78 297.0 210 65.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 4.6e-78 296.2 382 44.5
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.3e-77 294.7 318 51.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.8e-72 276.6 255 54.9
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.3e-68 263.5 390 39.5
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.3e-61 240.7 493 35.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.3e-61 240.7 392 38.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 3.5e-54 216.9 309 41.1
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 2.3e-37 161.0 173 52.6
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.8e-34 151.4 389 31.6
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.8e-32 143.7 399 32.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.9e-31 141.4 113 61.9
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.1e-30 136.3 351 31.3
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.0e-29 135.6 332 34.0
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.4e-29 135.2 184 43.5
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.3e-27 128.6 129 51.9
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.3e-21 107.8 53 86.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 6.1e-14 83.2 218 29.4
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.8e-06 57.8 78 38.5


User provided reference genes

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