Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.1e-76 287.0 141 100.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 3.3e-61 238.4 141 81.6
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.0e-54 216.9 141 74.5
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.0e-54 216.9 139 74.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 8.7e-54 213.8 141 73.8
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.3e-53 211.8 141 73.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 7.4e-53 210.7 141 70.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.3e-52 209.9 141 71.6
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-52 209.9 141 72.3
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 2.1e-52 209.1 142 71.1
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.1e-52 209.1 141 70.9
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.6e-52 208.4 138 73.2
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.6e-52 208.4 138 73.2
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.6e-52 208.4 139 72.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 4.8e-52 208.0 137 73.7
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 4.8e-52 208.0 139 68.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 6.2e-52 207.6 138 71.0
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.2e-52 207.6 139 71.2
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 8.1e-52 207.2 141 68.1
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.4e-51 206.5 138 72.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.4e-51 205.7 141 70.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 4.0e-51 204.9 138 69.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 4.0e-51 204.9 141 68.8
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.0e-51 204.9 139 73.4
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 5.3e-51 204.5 144 69.4
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.2e-50 203.4 139 68.3
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.5e-50 203.0 142 69.7
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.4e-50 201.8 137 70.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 3.4e-50 201.8 139 66.9
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 3.4e-50 201.8 139 66.9
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 7.6e-50 200.7 138 70.3
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 9.9e-50 200.3 141 66.7
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 9.9e-50 200.3 139 69.1
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.3e-49 199.9 139 68.3
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.2e-49 199.1 138 70.3
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.8e-49 198.4 139 68.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.8e-49 198.4 139 67.6
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 3.8e-49 198.4 139 68.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.9e-49 198.0 139 68.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.4e-49 197.2 139 69.1
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.1e-48 196.8 135 70.4
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.1e-48 196.8 141 65.2
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.1e-48 196.8 133 71.4
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 3.2e-48 195.3 138 66.7
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 4.2e-48 194.9 139 67.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.2e-48 194.9 141 64.5
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.5e-48 194.5 139 66.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 9.3e-48 193.7 140 67.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-47 193.4 139 68.3
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.2e-47 193.4 139 69.1
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.6e-47 193.0 139 71.2
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-47 193.0 141 66.0
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.1e-47 192.6 139 65.5
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 2.1e-47 192.6 139 67.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.7e-47 192.2 138 65.9
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.7e-47 192.2 138 65.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.7e-47 192.2 139 67.6
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.7e-47 192.2 122 76.2
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 3.5e-47 191.8 139 67.6
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 4.6e-47 191.4 126 73.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 6.0e-47 191.0 139 66.9
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 7.9e-47 190.7 139 65.5
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 7.9e-47 190.7 139 68.3
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.0e-46 190.3 122 75.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.0e-46 190.3 138 70.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.3e-46 189.9 139 69.1
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.8e-46 189.5 139 64.7
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 64.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.3e-46 189.1 141 64.5
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 68.4
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 68.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.0e-46 188.7 139 64.7
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 3.9e-46 188.3 111 79.3
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 5.1e-46 188.0 136 63.2
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 5.1e-46 188.0 139 66.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.9e-45 186.0 136 65.4
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.3e-45 185.3 137 63.5
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 5.6e-45 184.5 134 64.9
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 7.4e-45 184.1 137 63.5
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.3e-44 183.3 136 61.8
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-44 183.0 136 63.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.6e-44 183.0 136 65.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.1e-44 182.6 138 62.3
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.1e-44 182.6 136 62.5
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.7e-44 181.8 138 62.3
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.7e-44 181.8 138 62.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.7e-44 181.8 135 65.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 4.8e-44 181.4 139 61.9
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 8.1e-44 180.6 136 63.2
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 8.1e-44 180.6 138 61.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 8.1e-44 180.6 138 61.6
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.1e-43 180.3 140 61.4
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.4e-43 179.9 137 61.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.4e-43 179.1 122 69.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.1e-43 178.7 136 63.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.0e-43 178.3 137 62.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 4.0e-43 178.3 135 65.9
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 4.0e-43 178.3 135 65.9
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 4.0e-43 178.3 135 65.9
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 4.0e-43 178.3 140 58.6
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.3e-43 177.9 122 69.7
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-42 175.6 137 61.3
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.4e-42 175.3 141 58.9
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 3.4e-42 175.3 138 63.8
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.2e-41 172.6 132 60.6
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 3.8e-41 171.8 107 72.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 8.4e-41 170.6 143 60.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.9e-40 169.5 119 69.7
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.0e-38 163.7 139 59.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.0e-38 163.7 135 62.2
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.9e-38 161.8 117 65.0
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.3e-37 158.7 107 66.4
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.1e-36 156.0 141 54.6
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.7e-36 155.2 138 57.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.7e-33 146.4 131 55.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.2e-33 146.0 111 64.0
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.8e-33 145.2 130 51.5
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 5.5e-32 141.4 118 55.9
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 7.2e-32 141.0 114 57.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 9.3e-32 140.6 118 55.1
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 9.3e-32 140.6 98 69.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.3e-32 140.6 119 56.3
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.7e-31 139.0 117 53.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 3.3e-29 132.1 95 68.4
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.8e-27 126.3 85 69.4
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 3.4e-26 122.1 84 65.5
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.3e-25 120.2 116 50.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.8e-25 118.6 89 64.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.2e-18 97.1 89 56.2
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.1e-13 80.5 90 45.6
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.1e-13 80.5 54 68.5
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 1.8e-06 56.6 43 58.1


User provided reference genes

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