Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 0.0e+00 1142.1 592 100.0
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.0e-244 850.1 615 75.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.0e-221 772.7 600 66.8
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 8.6e-220 767.3 621 64.4
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 3.6e-218 761.9 607 67.5
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.4e-214 749.2 590 66.1
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 4.1e-214 748.4 591 65.1
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 1.6e-210 736.5 627 62.2
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-209 733.4 594 63.1
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 4.9e-207 724.9 611 61.0
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 6.4e-207 724.5 594 62.1
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 9.2e-206 720.7 594 63.3
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 7.8e-205 717.6 590 62.7
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.0e-204 717.2 595 67.1
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 6.6e-204 714.5 591 63.3
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.1e-201 707.2 594 61.3
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.8e-201 706.4 595 65.0
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.1e-201 705.7 589 64.5
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 5.8e-200 701.4 600 61.2
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 5.8e-200 701.4 593 63.1
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.9e-199 699.1 598 61.0
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 3.7e-199 698.7 602 61.6
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 8.3e-199 697.6 593 64.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.4e-198 696.8 601 61.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.4e-198 696.0 598 60.7
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 3.2e-198 695.7 608 61.7
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.2e-197 693.7 614 63.7
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.6e-197 693.3 615 60.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.6e-197 693.3 602 61.5
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 2.7e-197 692.6 607 62.3
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 2.7e-197 692.6 593 64.1
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 4.6e-197 691.8 610 62.5
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.0e-196 690.6 602 61.3
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 3.3e-195 685.6 602 63.6
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.3e-195 685.3 588 61.2
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 5.6e-195 684.9 592 64.4
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 7.3e-195 684.5 624 57.5
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 1.6e-194 683.3 586 60.9
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.1e-193 680.6 616 59.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 3.1e-193 679.1 594 61.4
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.1e-193 679.1 612 59.2
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 6.8e-193 677.9 586 61.3
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 6.8e-193 677.9 611 59.6
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.6e-192 676.0 600 62.0
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 3.4e-192 675.6 595 61.3
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.7e-191 673.3 610 61.8
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 2.2e-191 672.9 603 58.2
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.7e-191 672.2 599 60.1
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.1e-190 670.6 597 60.5
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 1.1e-190 670.6 599 60.8
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.9e-190 669.8 637 57.0
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.4e-190 669.5 559 60.6
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.6e-189 666.8 596 59.4
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 7.8e-189 664.5 611 57.1
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 6.6e-188 661.4 606 58.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 3.3e-187 659.1 620 59.2
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 7.3e-187 657.9 612 60.6
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 9.5e-187 657.5 613 57.7
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 6.2e-186 654.8 548 61.3
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 8.1e-186 654.4 608 58.2
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.2e-184 650.6 614 58.0
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.2e-184 650.6 623 58.4
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.5e-184 650.2 612 58.8
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.0e-184 649.8 597 57.5
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.6e-184 649.4 597 59.3
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 5.8e-184 648.3 619 58.2
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 7.6e-184 647.9 618 58.1
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.7e-183 646.7 507 68.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.8e-183 645.6 625 58.4
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 3.8e-183 645.6 614 58.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.4e-182 643.7 621 57.8
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.4e-182 643.7 617 59.8
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.4e-182 642.9 602 57.6
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.4e-182 642.9 602 57.6
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 6.0e-181 638.3 614 60.3
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.3e-180 636.3 624 56.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 2.3e-180 636.3 582 61.3
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 5.1e-180 635.2 600 56.2
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 6.6e-180 634.8 543 61.3
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.5e-179 633.6 580 58.8
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.5e-179 633.6 571 62.0
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.3e-179 632.5 610 58.7
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 7.3e-179 631.3 594 58.6
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 5.3e-177 625.2 619 57.8
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.0e-176 623.2 483 65.8
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 3.4e-176 622.5 626 55.0
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 5.4e-174 615.1 612 55.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 5.4e-174 615.1 541 62.7
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 2.4e-166 589.7 472 61.4
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.1e-165 586.6 523 58.3
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.6e-162 577.0 600 53.3
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 7.1e-158 561.6 591 52.1
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.3e-156 557.4 605 49.4
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.3e-155 552.4 603 51.7
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-148 531.2 366 67.5
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.4e-142 510.8 625 47.8
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 4.6e-141 505.8 531 50.1
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 4.5e-136 489.2 544 50.4
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 4.5e-136 489.2 439 55.6
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 7.2e-126 455.3 414 63.0
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 6.8e-92 342.4 340 56.5
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.2e-90 337.4 348 56.6
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.6e-83 313.9 520 37.1
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 9.3e-49 199.1 550 34.2
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 7.9e-48 196.1 250 41.6
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.1e-47 193.4 259 38.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.5e-43 180.3 484 34.1
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 8.4e-42 176.0 281 33.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.3e-36 156.8 198 47.5
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 3.4e-35 154.1 90 76.7
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 3.8e-26 124.0 82 70.7
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.1e-23 113.6 83 69.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 6.3e-21 106.7 98 61.2
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 1.4e-20 105.5 232 28.4
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 6.9e-20 103.2 61 72.1
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-18 99.4 71 69.0
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.1e-15 87.0 80 60.0


User provided reference genes

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