Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.7e-157 557.4 293 100.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.4e-125 453.4 305 80.7
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.5e-113 412.1 319 72.4
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.7e-86 322.0 225 74.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 6.0e-81 305.1 300 58.7
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.0e-80 302.0 279 59.1
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.3e-79 298.9 304 55.3
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.3e-79 298.9 307 54.7
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.8e-78 296.2 300 56.3
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.2e-78 295.0 304 55.3
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 6.2e-78 295.0 231 70.1
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 8.0e-78 294.7 296 55.1
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.1e-77 294.3 244 66.0
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.2e-77 292.0 241 65.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.8e-77 291.6 241 65.1
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-76 290.8 212 69.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.0e-76 290.0 292 58.9
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 5.8e-76 288.5 225 66.2
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 9.8e-76 287.7 249 61.8
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.9e-75 285.4 257 59.5
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.1e-74 284.3 224 67.9
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.1e-74 284.3 294 56.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-74 283.9 292 56.5
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.4e-74 283.9 293 57.0
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.4e-74 283.1 303 53.5
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 4.1e-74 282.3 263 59.3
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 5.4e-74 282.0 268 59.3
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.4e-74 282.0 290 56.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.2e-74 281.2 290 55.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.6e-73 280.4 268 59.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.6e-73 280.4 306 55.9
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.1e-73 280.0 251 61.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.7e-73 279.6 236 63.6
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.7e-73 279.6 268 57.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.0e-72 277.7 242 62.0
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.7e-72 276.9 231 64.5
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.7e-72 276.9 291 54.6
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.3e-72 276.6 236 64.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.6e-72 275.0 263 59.7
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.9e-71 273.5 238 63.9
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.5e-71 273.1 296 54.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.3e-71 272.7 277 57.0
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 3.3e-71 272.7 393 48.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.6e-71 271.9 295 54.2
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 5.6e-71 271.9 257 58.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 7.3e-71 271.6 295 53.6
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.2e-70 270.8 304 55.6
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.6e-70 270.4 248 60.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.1e-70 270.0 259 59.1
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.8e-70 269.6 225 63.6
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.6e-70 269.2 263 58.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.7e-70 268.9 277 56.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 6.2e-70 268.5 295 53.9
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 6.2e-70 268.5 298 53.0
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-69 266.9 296 53.4
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.0e-69 265.8 282 55.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 4.0e-69 265.8 225 63.6
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.0e-68 263.5 283 53.0
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.6e-68 263.1 315 50.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 5.8e-68 261.9 285 53.0
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.4e-66 256.5 256 59.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 9.2e-66 254.6 256 54.7
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.7e-65 253.1 193 67.9
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.3e-64 250.0 263 55.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.3e-64 250.0 263 55.1
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.0e-64 249.6 296 51.0
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 3.0e-64 249.6 296 51.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.9e-64 249.2 222 59.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.9e-64 249.2 308 51.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.1e-63 247.7 310 51.0
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.3e-63 246.1 336 47.9
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.3e-63 245.7 175 72.6
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.3e-63 245.7 237 57.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.3e-63 245.7 296 51.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 4.7e-62 242.3 312 47.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.1e-62 241.5 315 48.3
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.8e-61 240.4 218 60.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.1e-61 239.6 222 61.3
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-60 237.7 292 51.0
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.5e-60 237.3 229 58.1
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.5e-60 237.3 207 60.4
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 2.6e-60 236.5 251 54.2
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.4e-60 236.1 314 51.6
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 7.6e-60 235.0 249 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.2e-59 233.4 238 53.8
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.8e-59 232.6 292 50.3
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.9e-59 232.3 174 69.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.1e-58 231.1 189 65.1
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.4e-58 230.7 268 49.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 4.6e-57 225.7 260 51.2
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 6.0e-57 225.3 200 62.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.3e-56 224.2 202 56.9
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.7e-56 223.8 239 54.8
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.3e-55 219.5 204 57.8
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.3e-51 207.6 217 55.8
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.6e-49 200.7 176 62.5
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.5e-47 194.1 228 52.6
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.9e-47 193.7 241 49.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.1e-45 186.4 147 65.3
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.2e-44 184.5 152 63.8
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.8e-44 182.2 136 68.4
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.0e-41 172.2 128 66.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 4.3e-39 166.0 211 49.3
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.4e-37 161.0 237 47.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 4.0e-37 159.5 211 46.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 4.0e-37 159.5 211 40.8
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.5e-36 156.0 138 58.7
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 5.8e-36 155.6 137 61.3
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.3e-35 154.5 142 54.9
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 8.4e-35 151.8 185 47.0
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.1e-32 142.5 187 42.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.8e-29 134.0 110 65.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.1e-26 122.1 116 57.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 4.3e-23 112.8 99 62.6
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 3.7e-22 109.8 187 36.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 3.8e-19 99.8 176 33.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.6e-17 93.2 189 35.4
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 5.7e-15 85.9 69 66.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 3.7e-14 83.2 78 57.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.9e-10 70.9 93 45.2
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.3e-06 58.2 52 51.9
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 4.8e-06 56.2 48 62.5


User provided reference genes

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