Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0474761 Helianthus annuus HOM05D004386 ORTHO05D005247 4.0e-47 191.0 93 100.0
HanXRQChr15g0475331 Helianthus annuus HOM05D004386 ORTHO05D005247 1.9e-33 145.6 79 89.9
HanXRQChr17g0548511 Helianthus annuus HOM05D004386 ORTHO05D005247 3.0e-26 121.7 79 78.5
DCAR_021718 Daucus carota HOM05D004386 ORTHO05D005247 3.4e-22 108.2 80 65.0
Lsat_1_v5_gn_0_39820 Lactuca sativa HOM05D004386 ORTHO05D005247 4.4e-22 107.8 78 69.2
Solyc02g086470.3 Solanum lycopersicum HOM05D004386 ORTHO05D005247 1.1e-20 103.2 80 63.8
PGSC0003DMG400012630 Solanum tuberosum HOM05D004386 ORTHO05D005247 1.1e-20 103.2 80 63.8
DCAR_001447 Daucus carota HOM05D004386 ORTHO05D005247 1.4e-20 102.8 80 61.2
PGR083G0256 Punica granatum HOM05D004386 ORTHO05D005247 1.4e-20 102.8 80 58.8
Peaxi162Scf00129g01540 Petunia axillaris HOM05D004386 ORTHO05D005247 2.4e-20 102.1 80 63.8
CSS0006108 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 3.2e-20 101.7 80 63.8
Hma1.2p1_1291F.1_g273490 Hydrangea macrophylla HOM05D004386 ORTHO05D005247 3.2e-20 101.7 79 63.3
Nitab4.5_0006802g0040 Nicotiana tabacum HOM05D004386 ORTHO05D005247 3.2e-20 101.7 80 63.8
Nitab4.5_0002682g0120 Nicotiana tabacum HOM05D004386 ORTHO05D005247 4.1e-20 101.3 80 63.8
Nitab4.5_0005022g0020 Nicotiana tabacum HOM05D004386 ORTHO05D005247 4.1e-20 101.3 80 62.5
Oeu057061.2 Olea europaea HOM05D004386 ORTHO05D005247 5.4e-20 100.9 79 59.5
Sopen02g031190 Solanum pennellii HOM05D004386 ORTHO05D005247 7.1e-20 100.5 80 62.5
unitig_60.g25509 Utricularia gibba HOM05D004386 ORTHO05D005247 7.1e-20 100.5 79 59.5
Dinv33445 Davidia involucrata HOM05D004386 ORTHO05D005247 9.2e-20 100.1 80 61.2
Nitab4.5_0007892g0010 Nicotiana tabacum HOM05D004386 ORTHO05D005247 9.2e-20 100.1 79 63.3
Migut.H00080 Erythranthe guttata HOM05D004386 ORTHO05D005247 1.2e-19 99.8 79 60.8
MSTRG.24035 Avicennia marina HOM05D004386 ORTHO05D005247 1.6e-19 99.4 79 58.2
Manes.15G150000 Manihot esculenta HOM05D004386 ORTHO05D005247 1.6e-19 99.4 80 58.8
Haze_14735 Corylus avellana HOM05D004386 ORTHO05D005247 2.7e-19 98.6 79 57.0
QL02p074814 Quercus lobata HOM05D004386 ORTHO05D005247 3.5e-19 98.2 79 58.2
Ciclev10014954m.g Citrus clementina HOM05D004386 ORTHO05D005247 4.6e-19 97.8 80 58.8
GSVIVG01032413001 Vitis vinifera HOM05D004386 ORTHO05D005247 7.8e-19 97.1 79 60.8
Cfa007374 Carpinus fangiana HOM05D004386 ORTHO05D005247 1.0e-18 96.7 79 55.7
CiPaw.03G043200 Carya illinoinensis HOM05D004386 ORTHO05D005247 1.0e-18 96.7 79 55.7
Atru.chr6.2286 Acer truncatum HOM05D004386 ORTHO05D005247 1.3e-18 96.3 80 58.8
Aqoxy5G03803 Aquilegia oxysepala HOM05D004386 ORTHO05D005247 1.7e-18 95.9 80 53.8
Lj7A599T80 Lonicera japonica HOM05D004386 ORTHO05D005247 2.3e-18 95.5 80 58.8
Actinidia06000 Actinidia chinensis HOM05D004386 ORTHO05D005247 3.0e-18 95.1 80 60.0
Lalb_Chr06g0175761 Lupinus albus HOM05D004386 ORTHO05D005247 3.0e-18 95.1 79 58.2
Nn4g22656 Nelumbo nucifera HOM05D004386 ORTHO05D005247 3.0e-18 95.1 65 69.2
Rhsim10G0017900 Rhododendron simsii HOM05D004386 ORTHO05D005247 5.1e-18 94.4 80 58.8
CANSAT64G0389 Cannabis sativa HOM05D004386 ORTHO05D005247 6.6e-18 94.0 79 59.5
RcHm_v2.0_Chr2g0172901 Rosa chinensis HOM05D004386 ORTHO05D005247 6.6e-18 94.0 79 55.7
SalBow1G5144 Salvia bowleyana HOM05D004386 ORTHO05D005247 6.6e-18 94.0 79 55.7
MD09G1027800 Malus domestica HOM05D004386 ORTHO05D005247 1.1e-17 93.2 79 53.2
Psat1g054840 Pisum sativum HOM05D004386 ORTHO05D005247 1.1e-17 93.2 79 57.0
vmacro05857 Vaccinium macrocarpon HOM05D004386 ORTHO05D005247 1.1e-17 93.2 80 58.8
Manes.17G112600 Manihot esculenta HOM05D004386 ORTHO05D005247 1.5e-17 92.8 80 56.2
EL10Ac4g07711 Beta vulgaris HOM05D004386 ORTHO05D005247 1.9e-17 92.4 80 56.2
TWI12G1386 Tripterygium wilfordii HOM05D004386 ORTHO05D005247 1.9e-17 92.4 79 55.7
MBI16_g23842_MAGBIO Magnolia biondii HOM05D004386 ORTHO05D005247 3.3e-17 91.7 80 53.8
MD17G1027700 Malus domestica HOM05D004386 ORTHO05D005247 3.3e-17 91.7 79 53.2
Ca_04168_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 4.3e-17 91.3 79 57.0
Medtr6g005220 Medicago truncatula HOM05D004386 ORTHO05D005247 4.3e-17 91.3 79 57.0
FvH4_6g51280 Fragaria vesca HOM05D004386 ORTHO05D005247 5.6e-17 90.9 79 54.4
FAN09G3114 Fragaria x ananassa HOM05D004386 ORTHO05D005247 5.6e-17 90.9 79 54.4
FAN14G1865 Fragaria x ananassa HOM05D004386 ORTHO05D005247 5.6e-17 90.9 79 54.4
Prupe.3G291000 Prunus persica HOM05D004386 ORTHO05D005247 5.6e-17 90.9 79 54.4
CsaV3_3G042780 Cucumis sativus L. HOM05D004386 ORTHO05D005247 7.3e-17 90.5 79 58.2
Eucgr.J02238 Eucalyptus grandis HOM05D004386 ORTHO05D005247 7.3e-17 90.5 64 67.2
Phvul.007G112800 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 7.3e-17 90.5 79 55.7
TAR374G1586 Trochodendron aralioides HOM05D004386 ORTHO05D005247 7.3e-17 90.5 80 56.2
ClCG10G013910 Citrullus lanatus HOM05D004386 ORTHO05D005247 9.6e-17 90.1 79 59.5
Gohir.A07G222800 Gossypium hirsutum HOM05D004386 ORTHO05D005247 9.6e-17 90.1 79 54.4
Gohir.D07G229500 Gossypium hirsutum HOM05D004386 ORTHO05D005247 9.6e-17 90.1 79 54.4
Gorai.001G264600 Gossypium raimondii HOM05D004386 ORTHO05D005247 9.6e-17 90.1 79 54.4
FAN02G3912 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.2e-16 89.7 79 54.4
Lj2g0022197 Lotus japonicus HOM05D004386 ORTHO05D005247 1.2e-16 89.7 79 51.9
MELO3C026578.2 Cucumis melo HOM05D004386 ORTHO05D005247 1.6e-16 89.4 79 58.2
FAN05G0117 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.6e-16 89.4 79 54.4
Gohir.D11G070400 Gossypium hirsutum HOM05D004386 ORTHO05D005247 1.6e-16 89.4 79 54.4
Gorai.007G075500 Gossypium raimondii HOM05D004386 ORTHO05D005247 1.6e-16 89.4 79 54.4
Potri.001G345400 Populus trichocarpa HOM05D004386 ORTHO05D005247 1.6e-16 89.4 80 53.8
Sed0019384 Sechium edule HOM05D004386 ORTHO05D005247 1.6e-16 89.4 78 59.0
COL.COLO4_29103 Corchorus olitorius HOM05D004386 ORTHO05D005247 2.1e-16 89.0 79 54.4
Cpa.g.sc108.64 Carica papaya HOM05D004386 ORTHO05D005247 2.8e-16 88.6 64 62.5
Duzib147G0401 Durio zibethinus HOM05D004386 ORTHO05D005247 3.6e-16 88.2 79 53.2
Sabra16G0224400 Salix brachista HOM05D004386 ORTHO05D005247 3.6e-16 88.2 79 55.7
Cc07_g01760 Coffea canephora HOM05D004386 ORTHO05D005247 6.2e-16 87.4 87 51.7
Glyma.19G005200 Glycine max HOM05D004386 ORTHO05D005247 6.2e-16 87.4 79 55.7
Gohir.A11G066200 Gossypium hirsutum HOM05D004386 ORTHO05D005247 6.2e-16 87.4 79 53.2
Hund23207 Selenicereus undatus HOM05D004386 ORTHO05D005247 6.2e-16 87.4 80 53.8
Thecc.04G016500 Theobroma cacao HOM05D004386 ORTHO05D005247 6.2e-16 87.4 79 53.2
TPR.G14088 Trifolium pratense HOM05D004386 ORTHO05D005247 6.2e-16 87.4 83 55.4
AUR62015863 Chenopodium quinoa HOM05D004386 ORTHO05D005247 8.1e-16 87.0 80 53.8
Glyma.05G004600 Glycine max HOM05D004386 ORTHO05D005247 8.1e-16 87.0 79 54.4
Phvul.004G010500 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 8.1e-16 87.0 79 54.4
Medtr6g005920 Medicago truncatula HOM05D004386 ORTHO05D005247 1.1e-15 86.7 79 55.7
Sed0006302 Sechium edule HOM05D004386 ORTHO05D005247 1.1e-15 86.7 79 57.0
PSO832G3302 Papaver somniferum HOM05D004386 ORTHO05D005247 1.4e-15 86.3 67 62.7
AUR62020360 Chenopodium quinoa HOM05D004386 ORTHO05D005247 1.8e-15 85.9 80 53.8
PSO063G4583 Papaver somniferum HOM05D004386 ORTHO05D005247 3.1e-15 85.1 67 62.7
arahy.Tifrunner.gnm1.ann1.86LGQR Arachis hypogaea HOM05D004386 ORTHO05D005247 4.0e-15 84.7 79 54.4
BcaC06g33792 Brassica carinata HOM05D004386 ORTHO05D005247 4.0e-15 84.7 79 50.6
THA.LOC104805372 Tarenaya hassleriana HOM05D004386 ORTHO05D005247 5.2e-15 84.3 79 53.2
BcaC06g30967 Brassica carinata HOM05D004386 ORTHO05D005247 8.9e-15 83.6 79 48.1
arahy.Tifrunner.gnm1.ann1.5LAL7M Arachis hypogaea HOM05D004386 ORTHO05D005247 1.5e-14 82.8 79 53.2
CDE06G2157 Ceratophyllum demersum HOM05D004386 ORTHO05D005247 2.0e-14 82.4 80 52.5
Sc11g0004050 Simmondsia chinensis HOM05D004386 ORTHO05D005247 2.0e-14 82.4 82 52.4
C07p36830 Brassica napus HOM05D004386 ORTHO05D005247 2.6e-14 82.0 79 49.4
BolC7t44196H Brassica oleracea HOM05D004386 ORTHO05D005247 2.6e-14 82.0 79 49.4
AL5G17060 Arabidopsis lyrata HOM05D004386 ORTHO05D005247 4.4e-14 81.3 79 49.4
A06p41010 Brassica napus HOM05D004386 ORTHO05D005247 4.4e-14 81.3 79 49.4
BraA06t27020Z Brassica rapa HOM05D004386 ORTHO05D005247 4.4e-14 81.3 79 49.4
CSS0036222 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 5.8e-14 80.9 77 54.5
AT3G27640 Arabidopsis thaliana HOM05D004386 ORTHO05D005247 7.6e-14 80.5 79 49.4
Sp2g16770 Schrenkiella parvula HOM05D004386 ORTHO05D005247 7.6e-14 80.5 79 48.1
Thhalv10004025m.g Eutrema salsugineum HOM05D004386 ORTHO05D005247 1.7e-13 79.3 79 49.4
A09p03460 Brassica napus HOM05D004386 ORTHO05D005247 2.9e-13 78.6 79 48.1
BraA09t35984Z Brassica rapa HOM05D004386 ORTHO05D005247 2.9e-13 78.6 79 48.1
Carub.0005s0608 Capsella rubella HOM05D004386 ORTHO05D005247 2.9e-13 78.6 79 49.4
CARHR149060 Cardamine hirsuta HOM05D004386 ORTHO05D005247 6.4e-13 77.4 79 48.1
SEGI_08021 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 6.4e-13 77.4 79 46.8
HPP92_006408 Vanilla planifolia HOM05D004386 ORTHO05D005247 1.4e-12 76.3 80 48.8
Zm00001eb216890 Zea mays HOM05D004386 ORTHO05D005247 3.2e-12 75.1 79 48.1
Mapoly0154s0005 Marchantia polymorpha HOM05D004386 ORTHO05D005247 1.6e-11 72.8 79 44.3
Zm00001eb053910 Zea mays HOM05D004386 ORTHO05D005247 6.0e-11 70.9 79 45.6
Aa31LG2G5030 Aethionema arabicum HOM05D004386 ORTHO05D005247 2.3e-10 68.9 79 44.3
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 1.5e-09 66.2 64 48.4
CBR_g29535 Chara braunii HOM05D004386 ORTHO05D005247 2.5e-09 65.5 79 41.8
SGA_v2.0_scaffold481G52308 Striga asiatica HOM05D004386 ORTHO05D005247 9.6e-09 63.5 52 59.6
AagrBONN_evm.TU.Sc2ySwM_117.1179 Anthoceros agrestis HOM05D004386 ORTHO05D005247 1.6e-08 62.8 79 45.6
Pp3c15_21840 Physcomitrium patens HOM05D004386 ORTHO05D005247 1.6e-08 62.8 80 40.0
Ca_11629_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 2.6e-06 55.5 82 40.2
Ca_30239_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 2.6e-06 55.5 82 40.2
Zm00001eb015370 Zea mays HOM05D004386 ORTHO05D005247 3.4e-06 55.1 49 53.1


User provided reference genes

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