Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0474741 Helianthus annuus HOM05D004386 ORTHO05D005247 6.7e-43 176.8 80 100.0
HanXRQChr15g0475331 Helianthus annuus HOM05D004386 ORTHO05D005247 5.7e-26 120.6 54 100.0
HanXRQChr17g0548511 Helianthus annuus HOM05D004386 ORTHO05D005247 9.7e-18 93.2 46 87.0
GSVIVG01032413001 Vitis vinifera HOM05D004386 ORTHO05D005247 4.1e-16 87.8 57 71.9
Lsat_1_v5_gn_0_39820 Lactuca sativa HOM05D004386 ORTHO05D005247 1.2e-15 86.3 46 82.6
Dinv33445 Davidia involucrata HOM05D004386 ORTHO05D005247 1.6e-15 85.9 46 82.6
Nitab4.5_0005022g0020 Nicotiana tabacum HOM05D004386 ORTHO05D005247 1.6e-15 85.9 57 66.7
Nitab4.5_0006802g0040 Nicotiana tabacum HOM05D004386 ORTHO05D005247 1.6e-15 85.9 46 82.6
Nitab4.5_0007892g0010 Nicotiana tabacum HOM05D004386 ORTHO05D005247 1.6e-15 85.9 57 66.7
QL02p074814 Quercus lobata HOM05D004386 ORTHO05D005247 2.0e-15 85.5 57 66.7
CiPaw.03G043200 Carya illinoinensis HOM05D004386 ORTHO05D005247 2.6e-15 85.1 57 64.9
Actinidia06000 Actinidia chinensis HOM05D004386 ORTHO05D005247 3.5e-15 84.7 57 66.7
Ciclev10014954m.g Citrus clementina HOM05D004386 ORTHO05D005247 3.5e-15 84.7 57 66.7
Potri.001G345400 Populus trichocarpa HOM05D004386 ORTHO05D005247 4.5e-15 84.3 57 66.7
Migut.H00080 Erythranthe guttata HOM05D004386 ORTHO05D005247 5.9e-15 84.0 52 69.2
Rhsim10G0017900 Rhododendron simsii HOM05D004386 ORTHO05D005247 5.9e-15 84.0 46 76.1
CSS0006108 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 7.7e-15 83.6 57 64.9
CSS0036222 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 7.7e-15 83.6 57 64.9
Hma1.2p1_1291F.1_g273490 Hydrangea macrophylla HOM05D004386 ORTHO05D005247 7.7e-15 83.6 57 66.7
Sabra16G0224400 Salix brachista HOM05D004386 ORTHO05D005247 7.7e-15 83.6 57 66.7
Prupe.3G291000 Prunus persica HOM05D004386 ORTHO05D005247 1.0e-14 83.2 69 58.0
SGA_v2.0_scaffold481G52308 Striga asiatica HOM05D004386 ORTHO05D005247 1.0e-14 83.2 46 76.1
Aa31LG2G5030 Aethionema arabicum HOM05D004386 ORTHO05D005247 1.3e-14 82.8 57 64.9
COL.COLO4_29103 Corchorus olitorius HOM05D004386 ORTHO05D005247 1.3e-14 82.8 51 66.7
MBI16_g23842_MAGBIO Magnolia biondii HOM05D004386 ORTHO05D005247 1.3e-14 82.8 51 70.6
DCAR_021718 Daucus carota HOM05D004386 ORTHO05D005247 1.7e-14 82.4 46 73.9
FAN05G0117 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.7e-14 82.4 46 73.9
FAN14G1865 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.7e-14 82.4 46 73.9
Lj7A599T80 Lonicera japonica HOM05D004386 ORTHO05D005247 1.7e-14 82.4 55 69.1
MD09G1027800 Malus domestica HOM05D004386 ORTHO05D005247 1.7e-14 82.4 69 58.0
RcHm_v2.0_Chr2g0172901 Rosa chinensis HOM05D004386 ORTHO05D005247 1.7e-14 82.4 46 73.9
FAN02G3912 Fragaria x ananassa HOM05D004386 ORTHO05D005247 2.2e-14 82.0 46 71.7
A06p41010 Brassica napus HOM05D004386 ORTHO05D005247 2.9e-14 81.6 57 63.2
BraA06t27020Z Brassica rapa HOM05D004386 ORTHO05D005247 2.9e-14 81.6 57 63.2
Cfa007374 Carpinus fangiana HOM05D004386 ORTHO05D005247 2.9e-14 81.6 57 63.2
Prupe.3G290400 Prunus persica HOM05D004386 ORTHO05D005247 2.9e-14 81.6 46 73.9
PGSC0003DMG400012630 Solanum tuberosum HOM05D004386 ORTHO05D005247 2.9e-14 81.6 44 77.3
vmacro05857 Vaccinium macrocarpon HOM05D004386 ORTHO05D005247 2.9e-14 81.6 44 77.3
Nitab4.5_0002682g0120 Nicotiana tabacum HOM05D004386 ORTHO05D005247 3.8e-14 81.3 46 78.3
Cc07_g01760 Coffea canephora HOM05D004386 ORTHO05D005247 6.5e-14 80.5 53 67.9
Haze_14735 Corylus avellana HOM05D004386 ORTHO05D005247 6.5e-14 80.5 51 66.7
Solyc02g086470.3 Solanum lycopersicum HOM05D004386 ORTHO05D005247 6.5e-14 80.5 44 75.0
Sopen02g031190 Solanum pennellii HOM05D004386 ORTHO05D005247 6.5e-14 80.5 44 75.0
AUR62015863 Chenopodium quinoa HOM05D004386 ORTHO05D005247 8.5e-14 80.1 57 63.2
FvH4_6g51280 Fragaria vesca HOM05D004386 ORTHO05D005247 8.5e-14 80.1 46 71.7
MD17G1028200 Malus domestica HOM05D004386 ORTHO05D005247 8.5e-14 80.1 46 71.7
Actinidia36112 Actinidia chinensis HOM05D004386 ORTHO05D005247 1.1e-13 79.7 44 75.0
AUR62020360 Chenopodium quinoa HOM05D004386 ORTHO05D005247 1.1e-13 79.7 57 63.2
Thhalv10004025m.g Eutrema salsugineum HOM05D004386 ORTHO05D005247 1.1e-13 79.7 57 63.2
Peaxi162Scf00129g01540 Petunia axillaris HOM05D004386 ORTHO05D005247 1.1e-13 79.7 46 76.1
Thecc.04G016500 Theobroma cacao HOM05D004386 ORTHO05D005247 1.1e-13 79.7 51 64.7
MSTRG.24035 Avicennia marina HOM05D004386 ORTHO05D005247 1.5e-13 79.3 52 63.5
Carub.0005s0608 Capsella rubella HOM05D004386 ORTHO05D005247 1.5e-13 79.3 57 61.4
FAN09G3114 Fragaria x ananassa HOM05D004386 ORTHO05D005247 1.5e-13 79.3 46 69.6
Atru.chr6.2286 Acer truncatum HOM05D004386 ORTHO05D005247 1.9e-13 79.0 51 66.7
EL10Ac4g07711 Beta vulgaris HOM05D004386 ORTHO05D005247 1.9e-13 79.0 57 63.2
DCAR_001447 Daucus carota HOM05D004386 ORTHO05D005247 1.9e-13 79.0 46 76.1
Gohir.A11G066200 Gossypium hirsutum HOM05D004386 ORTHO05D005247 1.9e-13 79.0 51 64.7
Gohir.D11G070400 Gossypium hirsutum HOM05D004386 ORTHO05D005247 1.9e-13 79.0 51 64.7
Gorai.007G075500 Gossypium raimondii HOM05D004386 ORTHO05D005247 1.9e-13 79.0 51 64.7
Manes.17G112600 Manihot esculenta HOM05D004386 ORTHO05D005247 1.9e-13 79.0 57 59.6
Nn4g22656 Nelumbo nucifera HOM05D004386 ORTHO05D005247 2.5e-13 78.6 51 66.7
Oeu057061.2 Olea europaea HOM05D004386 ORTHO05D005247 2.5e-13 78.6 46 67.4
SalBow1G5144 Salvia bowleyana HOM05D004386 ORTHO05D005247 2.5e-13 78.6 46 69.6
TAR374G1586 Trochodendron aralioides HOM05D004386 ORTHO05D005247 2.5e-13 78.6 57 59.6
C07p36830 Brassica napus HOM05D004386 ORTHO05D005247 3.2e-13 78.2 57 61.4
BolC7t44196H Brassica oleracea HOM05D004386 ORTHO05D005247 3.2e-13 78.2 57 61.4
ClCG10G013910 Citrullus lanatus HOM05D004386 ORTHO05D005247 3.2e-13 78.2 53 62.3
BcaC06g33792 Brassica carinata HOM05D004386 ORTHO05D005247 4.2e-13 77.8 57 61.4
Eucgr.J02238 Eucalyptus grandis HOM05D004386 ORTHO05D005247 4.2e-13 77.8 69 53.6
MD17G1027700 Malus domestica HOM05D004386 ORTHO05D005247 4.2e-13 77.8 69 53.6
AL5G17060 Arabidopsis lyrata HOM05D004386 ORTHO05D005247 5.5e-13 77.4 57 59.6
AT3G27640 Arabidopsis thaliana HOM05D004386 ORTHO05D005247 5.5e-13 77.4 57 59.6
BcaC06g30967 Brassica carinata HOM05D004386 ORTHO05D005247 5.5e-13 77.4 57 59.6
CARHR149060 Cardamine hirsuta HOM05D004386 ORTHO05D005247 5.5e-13 77.4 57 59.6
Manes.15G150000 Manihot esculenta HOM05D004386 ORTHO05D005247 5.5e-13 77.4 57 63.2
PSO063G4583 Papaver somniferum HOM05D004386 ORTHO05D005247 5.5e-13 77.4 51 64.7
PSO832G3302 Papaver somniferum HOM05D004386 ORTHO05D005247 5.5e-13 77.4 51 64.7
Aqoxy5G03803 Aquilegia oxysepala HOM05D004386 ORTHO05D005247 7.2e-13 77.0 46 67.4
A09p03460 Brassica napus HOM05D004386 ORTHO05D005247 7.2e-13 77.0 57 59.6
BraA09t35984Z Brassica rapa HOM05D004386 ORTHO05D005247 7.2e-13 77.0 57 59.6
THA.LOC104805372 Tarenaya hassleriana HOM05D004386 ORTHO05D005247 7.2e-13 77.0 57 61.4
Sc11g0004050 Simmondsia chinensis HOM05D004386 ORTHO05D005247 9.4e-13 76.6 46 67.4
Sed0019384 Sechium edule HOM05D004386 ORTHO05D005247 1.2e-12 76.3 52 63.5
Gohir.A07G222800 Gossypium hirsutum HOM05D004386 ORTHO05D005247 1.6e-12 75.9 51 62.7
Sp2g16770 Schrenkiella parvula HOM05D004386 ORTHO05D005247 1.6e-12 75.9 57 59.6
MELO3C026578.2 Cucumis melo HOM05D004386 ORTHO05D005247 2.1e-12 75.5 52 61.5
CsaV3_3G042780 Cucumis sativus L. HOM05D004386 ORTHO05D005247 2.1e-12 75.5 52 61.5
Duzib147G0401 Durio zibethinus HOM05D004386 ORTHO05D005247 2.1e-12 75.5 51 62.7
Gohir.D07G229500 Gossypium hirsutum HOM05D004386 ORTHO05D005247 2.1e-12 75.5 51 62.7
Gorai.001G264600 Gossypium raimondii HOM05D004386 ORTHO05D005247 2.1e-12 75.5 51 62.7
Hund23207 Selenicereus undatus HOM05D004386 ORTHO05D005247 2.1e-12 75.5 44 70.5
Glyma.19G005200 Glycine max HOM05D004386 ORTHO05D005247 6.1e-12 73.9 57 59.6
CANSAT64G0389 Cannabis sativa HOM05D004386 ORTHO05D005247 8.0e-12 73.6 46 71.7
Zm00001eb216890 Zea mays HOM05D004386 ORTHO05D005247 1.0e-11 73.2 46 65.2
arahy.Tifrunner.gnm1.ann1.5LAL7M Arachis hypogaea HOM05D004386 ORTHO05D005247 1.4e-11 72.8 44 68.2
arahy.Tifrunner.gnm1.ann1.86LGQR Arachis hypogaea HOM05D004386 ORTHO05D005247 1.4e-11 72.8 44 68.2
Os03g0699100 Oryza sativa ssp. japonica HOM05D004386 ORTHO05D005247 1.4e-11 72.8 46 65.2
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 3.0e-11 71.6 44 65.9
CBR_g29535 Chara braunii HOM05D004386 ORTHO05D005247 3.0e-11 71.6 43 72.1
Lalb_Chr06g0175761 Lupinus albus HOM05D004386 ORTHO05D005247 3.0e-11 71.6 53 60.4
Sed0006302 Sechium edule HOM05D004386 ORTHO05D005247 4.0e-11 71.2 52 55.8
TWI12G1386 Tripterygium wilfordii HOM05D004386 ORTHO05D005247 5.2e-11 70.9 51 58.8
Cpa.g.sc108.64 Carica papaya HOM05D004386 ORTHO05D005247 6.7e-11 70.5 69 53.6
VMungo0464G0678 Vigna mungo HOM05D004386 ORTHO05D005247 6.7e-11 70.5 57 57.9
HPP92_006408 Vanilla planifolia HOM05D004386 ORTHO05D005247 8.8e-11 70.1 51 60.8
BcaC04g23897 Brassica carinata HOM05D004386 ORTHO05D005247 1.1e-10 69.7 46 65.2
CDE07G1779 Ceratophyllum demersum HOM05D004386 ORTHO05D005247 1.5e-10 69.3 49 55.1
Glyma.05G004600 Glycine max HOM05D004386 ORTHO05D005247 1.5e-10 69.3 58 58.6
Pp3c15_21840 Physcomitrium patens HOM05D004386 ORTHO05D005247 1.5e-10 69.3 51 58.8
SEGI_08021 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 2.6e-10 68.6 43 65.1
Ca_04168_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 3.3e-10 68.2 52 55.8
Phvul.007G112800 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 3.3e-10 68.2 57 56.1
Psat1g054840 Pisum sativum HOM05D004386 ORTHO05D005247 3.3e-10 68.2 52 55.8
Zm00001eb053910 Zea mays HOM05D004386 ORTHO05D005247 9.7e-10 66.6 46 58.7
Oeu054620.1 Olea europaea HOM05D004386 ORTHO05D005247 1.3e-09 66.2 46 58.7
Mapoly0154s0005 Marchantia polymorpha HOM05D004386 ORTHO05D005247 2.8e-09 65.1 51 52.9
Phvul.004G010500 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 4.8e-09 64.3 46 63.0
TPR.G14088 Trifolium pratense HOM05D004386 ORTHO05D005247 1.1e-08 63.2 46 63.0
Medtr6g005220 Medicago truncatula HOM05D004386 ORTHO05D005247 1.8e-08 62.4 44 59.1
Medtr6g005920 Medicago truncatula HOM05D004386 ORTHO05D005247 1.8e-08 62.4 46 58.7
MCO05G657 Micromonas commoda HOM05D004386 ORTHO05D005247 5.9e-07 57.4 43 53.5


User provided reference genes

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