Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0474411 Helianthus annuus HOM05D001543 ORTHO05D001722 3.8e-54 214.5 106 100.0
CiPaw.13G024300 Carya illinoinensis HOM05D001543 ORTHO05D001722 3.6e-12 75.1 68 63.2
Ca_14794_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 1.1e-11 73.6 68 63.2
Medtr8g007390 Medicago truncatula HOM05D001543 ORTHO05D001722 1.8e-11 72.8 68 63.2
Glyma.07G119000 Glycine max HOM05D001543 ORTHO05D001722 3.1e-11 72.0 68 63.2
Sopen00g003100 Solanum pennellii HOM05D001543 ORTHO05D001722 4.0e-11 71.6 73 60.3
PGSC0003DMG400003302 Solanum tuberosum HOM05D001543 ORTHO05D001722 4.0e-11 71.6 73 60.3
arahy.Tifrunner.gnm1.ann1.D07A28 Arachis hypogaea HOM05D001543 ORTHO05D001722 1.2e-10 70.1 64 64.1
arahy.Tifrunner.gnm1.ann1.SVU6LR Arachis hypogaea HOM05D001543 ORTHO05D001722 1.2e-10 70.1 64 64.1
Actinidia21626 Actinidia chinensis HOM05D001543 ORTHO05D001722 2.6e-10 68.9 68 63.2
Lj3g0023648 Lotus japonicus HOM05D001543 ORTHO05D001722 3.4e-10 68.6 67 61.2
Nitab4.5_0002106g0030 Nicotiana tabacum HOM05D001543 ORTHO05D001722 4.4e-10 68.2 70 57.1
MD07G1096800 Malus domestica HOM05D001543 ORTHO05D001722 7.6e-10 67.4 68 64.7
Psat2g160240 Pisum sativum HOM05D001543 ORTHO05D001722 9.9e-10 67.0 68 58.8
Psat6g092200 Pisum sativum HOM05D001543 ORTHO05D001722 9.9e-10 67.0 68 58.8
Nitab4.5_0000228g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 1.3e-09 66.6 73 54.8
Glyma.18G248200 Glycine max HOM05D001543 ORTHO05D001722 1.7e-09 66.2 68 60.3
Oeu024403.4 Olea europaea HOM05D001543 ORTHO05D001722 1.7e-09 66.2 68 60.3
Solyc10g062340.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 2.2e-09 65.9 64 62.5
Glyma.09G245000 Glycine max HOM05D001543 ORTHO05D001722 4.9e-09 64.7 68 60.3
Prupe.2G120600 Prunus persica HOM05D001543 ORTHO05D001722 4.9e-09 64.7 68 60.3
Peaxi162Scf00103g01116 Petunia axillaris HOM05D001543 ORTHO05D001722 6.4e-09 64.3 67 58.2
vmacro21069 Vaccinium macrocarpon HOM05D001543 ORTHO05D001722 6.4e-09 64.3 68 58.8
FAN03G0838 Fragaria x ananassa HOM05D001543 ORTHO05D001722 1.1e-08 63.5 68 60.3
Lj9A553G38 Lonicera japonica HOM05D001543 ORTHO05D001722 1.1e-08 63.5 65 61.5
Peaxi162Scf00853g00434 Petunia axillaris HOM05D001543 ORTHO05D001722 1.1e-08 63.5 68 58.8
Phvul.008G049100 Phaseolus vulgaris HOM05D001543 ORTHO05D001722 1.1e-08 63.5 68 57.4
AUR62043413 Chenopodium quinoa HOM05D001543 ORTHO05D001722 3.2e-08 62.0 102 42.2
Migut.B01504 Erythranthe guttata HOM05D001543 ORTHO05D001722 3.2e-08 62.0 70 55.7
FvH4_7g09210 Fragaria vesca HOM05D001543 ORTHO05D001722 3.2e-08 62.0 68 58.8
FAN01G1148 Fragaria x ananassa HOM05D001543 ORTHO05D001722 3.2e-08 62.0 68 58.8
FAN06G2038 Fragaria x ananassa HOM05D001543 ORTHO05D001722 3.2e-08 62.0 68 58.8
FAN10G3183 Fragaria x ananassa HOM05D001543 ORTHO05D001722 3.2e-08 62.0 68 58.8
Medtr7g081210 Medicago truncatula HOM05D001543 ORTHO05D001722 3.2e-08 62.0 81 54.3
RcHm_v2.0_Chr1g0345261 Rosa chinensis HOM05D001543 ORTHO05D001722 3.2e-08 62.0 68 58.8
Solyc10g062180.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 3.2e-08 62.0 64 60.9
A05p04850 Brassica napus HOM05D001543 ORTHO05D001722 4.1e-08 61.6 54 63.0
Cpa.g.c42156 Carica papaya HOM05D001543 ORTHO05D001722 5.4e-08 61.2 86 52.3
Ca_08046_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 5.4e-08 61.2 68 61.8
Ca_08052_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 5.4e-08 61.2 68 61.8
Duzib138G1252 Durio zibethinus HOM05D001543 ORTHO05D001722 5.4e-08 61.2 70 61.4
Sopen10g026850 Solanum pennellii HOM05D001543 ORTHO05D001722 7.1e-08 60.8 64 59.4
Actinidia12638 Actinidia chinensis HOM05D001543 ORTHO05D001722 1.2e-07 60.1 65 58.5
TPR.G32125 Trifolium pratense HOM05D001543 ORTHO05D001722 1.2e-07 60.1 65 55.4
Psat3g099600 Pisum sativum HOM05D001543 ORTHO05D001722 1.6e-07 59.7 68 60.3
Rhsim01G0141800 Rhododendron simsii HOM05D001543 ORTHO05D001722 1.6e-07 59.7 68 54.4
TWI59G0607 Tripterygium wilfordii HOM05D001543 ORTHO05D001722 1.6e-07 59.7 84 51.2
VMungo1383G3467 Vigna mungo HOM05D001543 ORTHO05D001722 1.6e-07 59.7 68 55.9
Ah.05g177760 Amaranthus hybridus HOM05D001543 ORTHO05D001722 2.7e-07 58.9 69 63.8
BcaB02g08849 Brassica carinata HOM05D001543 ORTHO05D001722 2.7e-07 58.9 54 61.1
VMungo0331G0452 Vigna mungo HOM05D001543 ORTHO05D001722 3.5e-07 58.5 68 57.4
Cpa.g.sc41.80 Carica papaya HOM05D001543 ORTHO05D001722 7.8e-07 57.4 82 51.2
Lj7A549T58 Lonicera japonica HOM05D001543 ORTHO05D001722 7.8e-07 57.4 65 55.4
TWI23G1103 Tripterygium wilfordii HOM05D001543 ORTHO05D001722 7.8e-07 57.4 83 50.6
Sopen01g035640 Solanum pennellii HOM05D001543 ORTHO05D001722 1.0e-06 57.0 68 57.4
Oeu018078.2 Olea europaea HOM05D001543 ORTHO05D001722 1.3e-06 56.6 96 45.8
Nitab4.5_0000563g0160 Nicotiana tabacum HOM05D001543 ORTHO05D001722 1.7e-06 56.2 68 55.9
Lalb_Chr07g0195281 Lupinus albus HOM05D001543 ORTHO05D001722 3.0e-06 55.5 62 56.5
Phvul.010G044700 Phaseolus vulgaris HOM05D001543 ORTHO05D001722 3.0e-06 55.5 68 55.9
PGSC0003DMG400001694 Solanum tuberosum HOM05D001543 ORTHO05D001722 3.0e-06 55.5 68 55.9
TPR.G25979 Trifolium pratense HOM05D001543 ORTHO05D001722 3.0e-06 55.5 68 55.9
MBI04_g38565_MAGBIO Magnolia biondii HOM05D001543 ORTHO05D001722 6.6e-06 54.3 86 48.8
SalBow5G2614 Salvia bowleyana HOM05D001543 ORTHO05D001722 6.6e-06 54.3 68 52.9


User provided reference genes

Program Settings