Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0474251 Helianthus annuus HOM05D004965 ORTHO05D004401 2.2e-31 138.3 67 100.0
Lsat_1_v5_gn_0_35980 Lactuca sativa HOM05D004965 ORTHO05D004401 5.3e-17 90.5 84 60.7
ECA246G4714 Erigeron canadensis HOM05D004965 ORTHO05D004401 4.5e-16 87.4 77 59.7
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 9.6e-11 69.7 45 71.1
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 5.3e-09 63.9 84 44.0
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 9.0e-09 63.2 80 45.0
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 9.0e-09 63.2 80 45.0
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.2e-08 62.8 80 45.0
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 2.0e-08 62.0 84 46.4
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 2.6e-08 61.6 88 40.9
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 3.4e-08 61.2 84 44.0
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 4.5e-08 60.8 90 37.8
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 7.6e-08 60.1 90 41.1
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 7.6e-08 60.1 89 44.9
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 1.0e-07 59.7 91 41.8
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.0e-07 59.7 46 65.2
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.3e-07 59.3 84 40.5
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 1.3e-07 59.3 93 41.9
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.3e-07 59.3 86 41.9
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.7e-07 58.9 85 37.6
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 2.2e-07 58.5 89 43.8
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.2e-07 58.5 90 42.2
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 4.9e-07 57.4 72 43.1
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 4.9e-07 57.4 50 60.0
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 6.5e-07 57.0 32 81.2
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 8.4e-07 56.6 90 42.2
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 8.4e-07 56.6 46 58.7
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 8.4e-07 56.6 87 40.2
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.1e-06 56.2 82 45.1
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 1.1e-06 56.2 32 78.1
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.4e-06 55.8 47 59.6
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 1.4e-06 55.8 85 38.8
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.9e-06 55.5 71 42.3
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 1.9e-06 55.5 67 44.8
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 1.9e-06 55.5 64 46.9
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.5e-06 55.1 34 76.5
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.5e-06 55.1 72 43.1
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 2.5e-06 55.1 91 40.7
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 3.2e-06 54.7 84 40.5
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 3.2e-06 54.7 86 37.2
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 4.2e-06 54.3 30 86.7
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 4.2e-06 54.3 32 78.1
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 4.2e-06 54.3 31 80.6
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 4.2e-06 54.3 94 38.3
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 4.2e-06 54.3 33 72.7
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 5.5e-06 53.9 32 78.1
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 7.1e-06 53.5 34 73.5
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 7.1e-06 53.5 38 63.2
Medtr6g009390 Medicago truncatula HOM05D004965 ORTHO05D004401 7.1e-06 53.5 46 63.0
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 7.1e-06 53.5 32 75.0
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 7.1e-06 53.5 34 73.5
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 9.3e-06 53.1 34 70.6
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 9.3e-06 53.1 31 77.4
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 9.3e-06 53.1 32 68.8
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 9.3e-06 53.1 84 36.9


User provided reference genes

Program Settings