Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 2.2e-188 662.1 329 100.0
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.1e-144 516.9 327 79.2
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.5e-133 479.9 336 76.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 2.0e-130 469.5 320 70.6
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.1e-128 463.8 327 69.7
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 2.8e-127 459.1 316 70.6
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 6.2e-127 458.0 326 69.3
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.1e-126 457.2 325 69.5
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.3e-126 456.1 329 67.5
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 2.3e-126 456.1 332 68.4
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 3.1e-126 455.7 325 70.5
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 8.9e-126 454.1 335 66.3
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 2.6e-125 452.6 322 68.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.6e-125 452.6 329 66.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 3.4e-125 452.2 326 69.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 4.4e-125 451.8 324 68.8
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 6.4e-124 448.0 309 69.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 6.4e-124 448.0 309 69.6
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 6.4e-124 448.0 319 69.3
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 8.3e-124 447.6 325 67.4
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.1e-123 447.2 331 66.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.4e-123 446.8 325 68.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 4.1e-123 445.3 323 69.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 9.2e-123 444.1 324 67.3
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 9.2e-123 444.1 327 67.0
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.2e-122 443.7 324 66.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.6e-122 443.4 324 67.9
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.6e-122 443.4 344 65.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.6e-122 443.4 328 67.4
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.5e-122 442.2 324 67.0
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 7.8e-122 441.0 313 70.0
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 7.8e-122 441.0 306 69.3
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.0e-121 440.7 326 68.4
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 1.0e-121 440.7 347 62.5
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 1.0e-121 440.7 328 68.6
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.3e-121 439.5 314 66.9
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 3.9e-121 438.7 324 67.3
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.9e-121 438.7 319 69.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 5.1e-121 438.3 324 66.7
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 5.1e-121 438.3 326 67.5
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 8.6e-121 437.6 314 66.9
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.5e-120 436.8 321 67.6
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 2.1e-119 433.0 330 65.5
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.8e-119 432.6 309 68.3
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.1e-118 430.6 330 67.9
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 1.8e-118 429.9 307 67.4
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 3.1e-118 429.1 316 66.8
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 3.1e-118 429.1 320 66.2
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.5e-117 426.8 316 66.1
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.5e-117 426.8 324 66.4
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.5e-117 426.8 309 66.0
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.5e-117 426.8 310 65.8
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.4e-117 425.2 335 65.4
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 7.6e-117 424.5 303 68.0
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.3e-116 423.7 309 66.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.7e-116 423.3 332 63.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.7e-116 423.3 316 67.4
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.8e-116 422.2 308 67.2
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 8.4e-116 421.0 309 66.0
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.4e-115 420.2 332 62.7
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.9e-115 419.9 335 64.8
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.9e-115 419.9 335 64.8
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.9e-115 419.9 326 63.5
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 2.4e-115 419.5 332 62.7
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 9.2e-115 417.5 308 66.6
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.6e-114 416.8 320 66.2
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.5e-114 415.6 312 64.1
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 4.6e-114 415.2 318 67.6
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 4.6e-114 415.2 329 63.5
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.3e-113 413.7 313 66.1
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 3.9e-113 412.1 309 64.4
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 2.9e-108 396.0 343 62.1
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.9e-107 393.3 286 68.5
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.6e-106 390.2 323 61.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.3e-105 387.1 310 61.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 8.7e-105 384.4 286 68.5
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.5e-104 382.9 308 62.7
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.3e-103 380.6 324 59.9
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.1e-102 377.5 279 68.8
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 9.0e-94 347.8 331 55.9
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 4.5e-93 345.5 270 66.3
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.9e-91 340.1 325 56.9
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 3.9e-89 332.4 308 55.8
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.5e-85 318.9 235 65.5
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 3.8e-84 315.8 230 67.4
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.4e-83 313.9 301 51.5
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 4.2e-83 312.4 317 55.2
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 9.3e-83 311.2 222 68.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.7e-80 302.0 299 51.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 9.4e-75 284.6 209 68.4
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.7e-74 283.1 335 48.4
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.6e-74 282.3 303 51.2
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 7.9e-74 281.6 302 47.0
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 2.5e-67 260.0 202 65.3
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.7e-63 246.1 306 42.2
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.7e-63 246.1 184 65.2
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 5.0e-60 235.7 199 62.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.0e-56 223.8 350 36.6
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 3.7e-55 219.5 251 43.8
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.0e-53 213.8 163 65.0
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 5.7e-48 195.7 293 41.3
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 8.8e-41 171.8 210 45.2
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.0e-37 160.6 133 57.1
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.9e-36 156.8 201 45.3
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 1.7e-31 141.0 336 31.5
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.8e-31 140.2 88 73.9
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.7e-31 139.8 126 56.3
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 3.7e-31 139.8 101 68.3
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.2e-29 134.8 89 73.0
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.5e-29 132.9 103 57.3
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 4.7e-26 122.9 91 69.2
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 4.7e-26 122.9 102 55.9
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 6.8e-25 119.0 110 53.6
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.4e-22 111.3 283 28.3
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.4e-06 57.4 61 52.5
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 5.4e-06 56.2 86 33.7


User provided reference genes

Program Settings